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Trav11d Gene Detail
Summary
  • Symbol
    Trav11d
  • Name
    T cell receptor alpha variable 11D
  • Feature Type
    gene segment
  • IDs
    MGI:3649423
    NCBI Gene: 640196
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr14:53061814-53062369 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.11 cM
Strain
Comparison
more
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649423
gene segment Chr14:53061814-53062370 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0002519
gene segment Chr14:45994911-45995462 (+)
AKR/J MGP_AKRJ_G0002515
gene segment Chr14:48107517-48108068 (+)
BALB/cJ MGP_BALBcJ_G0002478
gene segment Chr1:168183203-168183754 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0002642
gene segment Chr14:49778346-49778901 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0002446
gene segment Chr14:44121606-44122157 (+)
CBA/J MGP_CBAJ_G0002483
gene segment Chr14:51249285-51249836 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0002510
gene segment Chr14:45712464-45713015 (+)
LP/J MGP_LPJ_G0002552
gene segment Chr14:48308394-48308945 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0002623
gene segment Chr14:46652363-46652914 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0002363
gene segment Chr14:43116760-43117315 (+)
WSB/EiJ MGP_WSBEiJ_G0002475
gene segment Chr14:47002222-47002511 (+)



Homology
more
  • Human Ortholog
    TRAV10, T cell receptor alpha variable 10
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV10, T cell receptor alpha variable 10
  • Synonyms
    TCRAV10S1, TCRAV24S1
  • Links
    NCBI Gene ID: 28676
    UniProt: A0A0B4J240

  • Chr Location
    14q11.2; chr14:21825472-21826075 (+)  GRCh38

Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000095088 Ensembl Gene Model | MGI Sequence Detail 556 C57BL/6J ±  kb
transcript ENSMUST00000103648 Ensembl | MGI Sequence Detail 342 Not Applicable  
polypeptide ENSMUSP00000100425 Ensembl | MGI Sequence Detail 114 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory