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Psma5-ps Pseudogene Detail
Summary
  • Symbol
    Psma5-ps
  • Name
    proteasome subunit alpha 5, pseudogene
  • Synonyms
    Gm8394
  • Feature Type
    pseudogene
  • IDs
    MGI:3647964
    NCBI Gene: 666974
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr10:85313488-85314439 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 41.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647964
pseudogene Chr10:85313469-85314439 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017600
protein coding gene Chr10:86223895-86224956 (+)
A/J MGP_AJ_G0017580
protein coding gene Chr10:83293595-83294445 (+)
AKR/J MGP_AKRJ_G0017539
protein coding gene Chr10:85608534-85609384 (+)
BALB/cJ MGP_BALBcJ_G0017543
protein coding gene Chr10:83543637-83544487 (+)
C3H/HeJ MGP_C3HHeJ_G0017365
protein coding gene Chr10:85695518-85696368 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018000
protein coding gene Chr10:89143387-89144338 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018027
protein coding gene Chr12:95652566-95653407 (-)
CAST/EiJ MGP_CASTEiJ_G0016932
protein coding gene Chr10:85552735-85553721 (+)
CBA/J MGP_CBAJ_G0017335
protein coding gene Chr10:92841140-92841990 (+)
DBA/2J MGP_DBA2J_G0017441
protein coding gene Chr10:82436704-82437554 (+)
FVB/NJ MGP_FVBNJ_G0017435
protein coding gene Chr10:81669102-81670110 (+)
LP/J MGP_LPJ_G0017513
protein coding gene Chr10:86864771-86866836 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017463
protein coding gene Chr10:94462815-94463795 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018037
protein coding gene Chr10:85537765-85538744 (+)
PWK/PhJ MGP_PWKPhJ_G0016713
protein coding gene Chr10:82304272-82305100 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Genomic Mutations
    1 involving Psma5-ps
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050490 Ensembl Gene Model | MGI Sequence Detail 952 C57BL/6J ±  kb
transcript ENSMUST00000079684 Ensembl | MGI Sequence Detail 952 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 11
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory