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Rplp1rt Gene Detail
Summary
  • Symbol
    Rplp1rt
  • Name
    ribosomal protein lateral stalk subunit P1, retrotransposed
  • Synonyms
    Gm5244
Location &
Maps
more
  • Sequence Map
    Chr19:12824168-12824612 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 8.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646958
 protein coding gene Chr19:12824046-12824788 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039688
 pseudogene Chr19:10340556-10341298 (+)
A/J MGP_AJ_G0039687
 pseudogene Chr19:9686521-9687262 (+)
AKR/J MGP_AKRJ_G0039612
 pseudogene Chr19:10163419-10164161 (+)
BALB/cJ MGP_BALBcJ_G0039657
 pseudogene Chr19:9695877-9696618 (+)
C3H/HeJ MGP_C3HHeJ_G0039318
 pseudogene Chr19:10050555-10051297 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040218
 pseudogene Chr19:10887034-10887776 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036853
 pseudogene Chr19:10317092-10317833 (+)
CAST/EiJ MGP_CASTEiJ_G0038440
 pseudogene Chr19:9614581-9615323 (+)
CBA/J MGP_CBAJ_G0039289
 pseudogene Chr19:10992792-10993534 (+)
DBA/2J MGP_DBA2J_G0039484
 pseudogene Chr19:9743145-9743887 (+)
FVB/NJ MGP_FVBNJ_G0039441
 pseudogene Chr19:9747781-9748522 (+)
LP/J MGP_LPJ_G0039523
 pseudogene Chr19:10414406-10415148 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039444
 pseudogene Chr19:10751923-10752664 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040319
 pseudogene Chr19:10145998-10146740 (+)
PWK/PhJ MGP_PWKPhJ_G0038116
 pseudogene Chr19:9197609-9198351 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037866
 pseudogene Chr19:9311394-9312137 (+)
WSB/EiJ MGP_WSBEiJ_G0038673
 pseudogene Chr19:10007786-10008528 (+)



Homology
more
  • Human Ortholog
    RPLP1, ribosomal protein lateral stalk subunit P1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPLP1, ribosomal protein lateral stalk subunit P1
  • Synonyms
    LP1, P1, RPP1
  • Links
    NCBI Gene ID: 6176
    neXtProt AC: NX_P05386
    UniProt: P05386

  • Chr Location
    15q23; chr15:69452814-69456205 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 383436 NCBI Gene Model | MGI Sequence Detail 445 C57BL/6J ±  kb
transcript BC158067 GenBank | ENA | DDBJ | MGI Sequence Detail 743 Not Specified  
polypeptide A0A494BA26 UniProt | EBI | MGI Sequence Detail 113 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR027534 Large ribosomal subunit protein P1/P2
    IPR038716 Large ribosomal subunit protein P1/P2, N-terminal domain
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 10
    Gene Ontology 2
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:164563 Mouse Genome Informatics Scientific Curators, Human to Mouse ISO GO annotation transfer. 2010 Oct;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory