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Ighv1-12 Gene Detail
Summary
  • Symbol
    Ighv1-12
  • Name
    immunoglobulin heavy variable V1-12
  • Feature Type
    gene segment
  • IDs
    MGI:3646284
    NCBI Gene: 629860
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr12:114615850-114616143 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 62.41 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    167 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646284
gene segment Chr12:114615850-114616318 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000078
gene segment Chr12:117325015-117325497 (-)
A/J MGP_AJ_G0000087
gene segment Chr12:112800189-112800656 (-)
AKR/J MGP_AKRJ_G0000083
gene segment Chr12:116134611-116135079 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0000084
gene segment Chr12:116487570-116488038 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000107
gene segment Chr12:120925511-120925979 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000061
gene segment Chr12:109116414-109116881 (-)
CAST/EiJ MGP_CASTEiJ_G0000083
gene segment Chr12:111290261-111290729 (-)
CBA/J MGP_CBAJ_G0000082
gene segment Chr12:125537655-125538123 (-)
DBA/2J MGP_DBA2J_G0000084
gene segment Chr12:112378433-112378895 (-)
FVB/NJ MGP_FVBNJ_G0000078
gene segment Chr12:111064973-111065441 (-)
LP/J MGP_LPJ_G0000089
gene segment Chr12:117243563-117244031 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000088
gene segment Chr12:128806385-128806853 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000097
gene segment Chr12:115515705-115516173 (-)
PWK/PhJ MGP_PWKPhJ_G0000073
gene segment Chr12:107033684-107034152 (-)
SPRET/EiJ MGP_SPRETEiJ_G0000066
gene segment Chr12:109762078-109762546 (-)
WSB/EiJ MGP_WSBEiJ_G0000080
gene segment Chr12:116527411-116527873 (-)



Homology
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 629860 NCBI Gene Model | MGI Sequence Detail 294 C57BL/6J ±  kb
transcript M17953 GenBank | EMBL | DDBJ | MGI Sequence Detail 458 Not Specified  
polypeptide A0A0A6YXJ9 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 3
References
more
  • Summaries
    All 13
    Gene Ontology 1
  • Earliest
    J:21939 Rothenfluh HS, et al., Analysis of patterns of DNA sequence variation in flanking and coding regions of murine germ-line immunoglobulin heavy-chain variable genes: evolutionary implications [published erratum appears in Proc Natl Acad Sci U S A 1995 Jul 18;92(15):7135]. Proc Natl Acad Sci U S A. 1994 Dec 6;91(25):12163-7
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory