Gm15464 Pseudogene Detail

Summary

• Symbol
  Gm15464
• Name
  predicted gene 15464
• Synonyms
  EG667053

• Feature Type
  pseudogene
• IDs
  MGI:3646025
  NCBI Gene: 100504573
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:60156414-60156844 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 30.45 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646025	pseudogene	Chr1:60156365-60156897 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0010145	pseudogene	Chr1:58040985-58041738 (+)
AKR/J	MGP_AKRJ_G0010122	pseudogene	Chr1:59691385-59692590 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0010064	pseudogene	Chr1:59923974-59925706 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010382	pseudogene	Chr1:62498001-62498471 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010033	pseudogene	Chr1:64491541-64495520 (+)
DBA/2J	MGP_DBA2J_G0010060	pseudogene	Chr1:57469206-57469941 (+)
FVB/NJ	MGP_FVBNJ_G0010083	pseudogene	Chr1:56756307-56756722 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0010044	pseudogene	Chr1:67357945-67363269 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010359	pseudogene	Chr1:59583004-59583384 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm15464
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm15464
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00000082609 (Evidence)
• NCBI Gene
  100504573

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082609	Ensembl Gene Model | MGI Sequence Detail	431	C57BL/6J
transcript	ENSMUST00000118718	Ensembl | MGI Sequence Detail	431	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm15464:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr6918	Chr1:60156388-60156399 (+)	-20 bp