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Mir30c-2 Gene Detail
Summary
  • Symbol
    Mir30c-2
  • Name
    microRNA 30c-2
  • Synonyms
    mir 30c-2, Mirn30c-2, mmu-mir-30c-2
  • Feature Type
    miRNA gene
  • IDs
    MGI:3619048
    NCBI Gene: 723964
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:23291701-23291784 bp, + strand
  • From miRBase annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 9.54 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3619048
miRNA gene Chr1:23291701-23291784 (.)
129S1/SvImJ MGP_129S1SvImJ_G0007599
miRNA gene Chr1:21070585-21070668 (+)
A/J MGP_AJ_G0007596
miRNA gene Chr1:20695888-20695971 (+)
AKR/J MGP_AKRJ_G0007568
miRNA gene Chr1:20854894-20854977 (+)
BALB/cJ MGP_BALBcJ_G0007570
miRNA gene Chr1:20426618-20426701 (+)
C3H/HeJ MGP_C3HHeJ_G0007517
miRNA gene Chr1:20880299-20880382 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007745
miRNA gene Chr1:22030837-22030920 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006923
miRNA gene Chr1:18816000-18816083 (+)
CAST/EiJ MGP_CASTEiJ_G0007417
miRNA gene Chr1:21009166-21009249 (+)
CBA/J MGP_CBAJ_G0007492
miRNA gene Chr1:22585451-22585534 (+)
DBA/2J MGP_DBA2J_G0007525
miRNA gene Chr1:20193338-20193421 (+)
FVB/NJ MGP_FVBNJ_G0007541
miRNA gene Chr1:19973038-19973121 (+)
LP/J MGP_LPJ_G0007607
miRNA gene Chr1:21274860-21274943 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007515
miRNA gene Chr1:23588541-23588624 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007746
miRNA gene Chr1:20821681-20821764 (+)
PWK/PhJ MGP_PWKPhJ_G0007350
miRNA gene Chr1:19955658-19955741 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007255
miRNA gene Chr1:20902076-20902159 (+)
WSB/EiJ MGP_WSBEiJ_G0007481
miRNA gene Chr1:20749165-20749248 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 723964 NCBI Gene Model | MGI Sequence Detail 84 C57BL/6J ±  kb
transcript NR_029717 RefSeq | MGI Sequence Detail 84 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    Primer pair 2
    Other 2
Other Database
Links
less
References
more
  • Summaries
    All 28
    Developmental Gene Expression 10
    Gene Ontology 6
    Phenotypes 3
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:266580 Kobayashi T, et al., Lin28a overexpression reveals the role of Erk signaling in articular cartilage development. Development. 2018 Aug 2;145(15)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/08/2019
MGI 6.13
The Jackson Laboratory