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I830127L07Rik
Pseudogene Detail
Symbol

Name
ID
I830127L07Rik
RIKEN cDNA I830127L07 gene
MGI:3612406
Feature Type
pseudogenic region
Genetic Map
Chromosome 15
34.29 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:75131377-75135128 bp, - strand
From VEGA annotation of GRCm38

  3752 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:113718  Vertebrate Homology Class
7 mouse; 6 rat

Protein SuperFamily: Ly-6-like protein

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Radiation induced(1)
Genomic Mutations involving I830127L07Rik (1)
Interactions
I830127L07Rik interacts with 4 markers (Mir432, Mir543, Mir877, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(3)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(3) cDNA(3)
Other database
links
VEGA Gene ModelOTTMUSG00000045167 (Evidence)
Entrez Gene546643 (Evidence)
UniGene322624
DoTSDT.101358011
NIA Mouse Gene IndexU240411
International Mouse Knockout Project StatusI830127L07Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000045167 VEGA Gene Model | MGI Sequence Detail 3752 C57BL/6J ±  kb
transcript OTTMUST00000118690 VEGA | MGI Sequence Detail 730 Not Applicable 
polypeptide Q3U8E9 UniProt | EBI | MGI Sequence Detail 110 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(8) UniProt(2)
Polymorphisms
SNPs within 2kb(114 from dbSNP Build 137)    SNPs within 2kb including multiple locations(144)
Protein-related
information
ResourceIDDescription
InterPro IPR001526 CD59 antigen
InterPro IPR018363 CD59 antigen, conserved site
InterPro IPR016054 Ly-6 antigen / uPA receptor -like
References
(Earliest) J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
(Latest) J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2014;
All references(11)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory