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G530011O06Rikx Gene Detail
Summary
  • Symbol
    G530011O06Rikx
  • Name
    RIKEN cDNA G530011O06 gene x
  • Synonyms
    G530011O06Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3603513
    NCBI Gene: 654820
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
  • Homologous PAR Feature
    G530011O06Riky
Location &
Maps
more
  • Sequence Map
    ChrX:168758039-168761913 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome XY, 79.33 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3603513
 lncRNA gene ChrX:168758039-168761913 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015767
 unclassified non-coding RNA gene Chr9:126995272-127000361 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0015738
 unclassified non-coding RNA gene ChrX:165260972-165264860 (-)
C3H/HeJ MGP_C3HHeJ_G0015557
 unclassified non-coding RNA gene ChrX:168528872-168532933 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0013913
 unclassified non-coding RNA gene ChrX:158002905-158011108 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0015537
 unclassified non-coding RNA gene ChrX:178088209-178092024 (-)
DBA/2J MGP_DBA2J_G0015635
 unclassified non-coding RNA gene ChrX:166074320-166078196 (-)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0014895
 unclassified non-coding RNA gene ChrX:144045485-144050205 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014681
 unclassified non-coding RNA gene ChrX:148000213-148012078 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    19
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072844 Ensembl Gene Model | MGI Sequence Detail 3875 C57BL/6J ±  kb
transcript ENSMUST00000154810 Ensembl | MGI Sequence Detail 2380 Not Applicable  
polypeptide Q3UE70 UniProt | EBI | MGI Sequence Detail 102 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 14
    Phenotypes 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:332469 Mouse Genome Informatics Scientific Curators, PAR markers in MGI. 2023;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory