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B020004J07Rik Gene Detail
Summary
  • Symbol
    B020004J07Rik
  • Name
    RIKEN cDNA B020004J07 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588238
    NCBI Gene: 545662
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:101834969-101844022 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 46.99 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    57 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588238
protein coding gene Chr4:101834969-101844023 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028496
protein coding gene Chr4:102162685-102166109 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0028190
protein coding gene Chr4:101768429-101777649 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028916
protein coding gene Chr4:106003315-106014486 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026208
protein coding gene Chr4:93850193-93853497 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0028159
protein coding gene Chr4:109355982-109375096 (-)
DBA/2J MGP_DBA2J_G0028309
protein coding gene Chr4:98275710-98285723 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0028409
protein coding gene Chr4:102458473-102465247 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0027355
protein coding gene Chr4:96449321-96452615 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027177
protein coding gene Chr4:98663189-98665733 (-)
WSB/EiJ MGP_WSBEiJ_G0027708
protein coding gene Chr4:101395375-101398128 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 545662 NCBI Gene Model | MGI Sequence Detail 9054 C57BL/6J ±  kb
    transcript NM_001033790 RefSeq | MGI Sequence Detail 1975 C57BL/6  
    polypeptide NP_001028962 RefSeq | MGI Sequence Detail 476 C57BL/6  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • InterPro Domains
      IPR032675 Leucine-rich repeat domain superfamily
      IPR026271 PRAME family
    Molecular
    Reagents
    less
    • All nucleic 4
      cDNA 4

      Microarray probesets 1
    References
    more
    • Summaries
      All 27
      Developmental Gene Expression 1
      Gene Ontology 1
      Phenotypes 12
    • Earliest
      J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
    • Latest
      J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    11/26/2019
    MGI 6.14
    The Jackson Laboratory