About   Help   FAQ
AY702102 Gene Detail
Summary
  • Symbol
    AY702102
  • Name
    cDNA sequence AY702102
  • Synonyms
    STDP1
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3525150
    NCBI Gene: 446211
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:169962015-169963187 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 89.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3525150
lncRNA gene Chr2:169962013-169963187 (-)
129S1/SvImJ MGP_129S1SvImJ_G0001053
unclassified gene Chr2:175969588-175970760 (-)
A/J MGP_AJ_G0001033
unclassified gene Chr2:168621674-168622846 (-)
AKR/J MGP_AKRJ_G0001018
unclassified gene Chr2:173675450-173676622 (-)
BALB/cJ MGP_BALBcJ_G0001025
unclassified gene Chr2:168999366-169000538 (-)
C3H/HeJ MGP_C3HHeJ_G0001007
unclassified gene Chr2:174055034-174056206 (-)
C57BL/6NJ MGP_C57BL6NJ_G0001139
unclassified gene Chr2:181034957-181036129 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000864
unclassified gene Chr2:161929579-161930749 (-)
CAST/EiJ MGP_CASTEiJ_G0000992
unclassified gene Chr2:174603718-174604892 (-)
CBA/J MGP_CBAJ_G0000999
unclassified gene Chr2:187787260-187788432 (-)
DBA/2J MGP_DBA2J_G0001003
unclassified gene Chr2:167721860-167723032 (-)
FVB/NJ MGP_FVBNJ_G0001013
unclassified gene Chr2:166315226-166316398 (-)
LP/J MGP_LPJ_G0001060
unclassified gene Chr2:175944262-175945434 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0001003
unclassified gene Chr2:190920614-190921786 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0001131
unclassified gene Chr2:173617176-173618348 (-)
PWK/PhJ MGP_PWKPhJ_G0000949
unclassified gene Chr2:167429630-167430802 (-)
SPRET/EiJ MGP_SPRETEiJ_G0000925
unclassified gene Chr2:172622451-172623624 (-)
WSB/EiJ MGP_WSBEiJ_G0001005
unclassified gene Chr2:174555866-174557038 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103935 Ensembl Gene Model | MGI Sequence Detail 1173 C57BL/6J ±  kb
transcript NR_131974 RefSeq | MGI Sequence Detail 1175 C57BL/6  
polypeptide Q66V79 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 15
  • Earliest
    J:97250 Hong S, et al., Identification and integrative analysis of 28 novel genes specifically expressed and developmentally regulated in murine spermatogenic cells. J Biol Chem. 2005 Mar 4;280(9):7685-93

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/18/2019
MGI 6.14
The Jackson Laboratory