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Crocc2
Gene Detail
Symbol

Name
ID
Crocc2
ciliary rootlet coiled-coil, rootletin family member 2
MGI:3045962
Synonyms
E030010N08Rik, LOC381284
Feature Type
protein coding gene
Genetic Map
Chromosome 1
47.17 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:93168725-93231072 bp, + strand
From VEGA annotation of GRCm38

  62348 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:141152  Vertebrate Homology Class
1 human; 1 mouse; 1 rat

HCOP human homology predictions: CROCC2
Gene Tree: Crocc2

Human
homologs
CROCC2, ciliary rootlet coiled-coil, rootletin family member 2
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 728763

Human Chr (Location): 2q37.3; chr2:240906359-240993307 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Crocc2 interacts with 216 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (154)    Tissues (14)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 154
cDNA source data(7)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(1)
Other database
links
VEGA Gene Model OTTMUSG00000033626 (Evidence)
Ensembl Gene Model ENSMUSG00000084989 (Evidence)
Entrez Gene 381284 (Evidence)
UniGene 193346
DFCI TC1625989
DoTS DT.91395114
NIA Mouse Gene Index U158506
Consensus CDS Project CCDS78654.1
International Mouse Phenotyping Consortium Status Crocc2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033626 VEGA Gene Model | MGI Sequence Detail 62348 C57BL/6J ±  kb
transcript OTTMUST00000084725 VEGA | MGI Sequence Detail 7132 Not Applicable 
polypeptide OTTMUSP00000045701 VEGA | MGI Sequence Detail 1638 Not Applicable 

For the selected sequences
All sequences(60) RefSeq(47) UniProt(1)
Polymorphisms
SNPs within 2kb(366 from dbSNP Build 137)
References
(Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(20)
Other
accession IDs
MGI:2685822

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory