About   Help   FAQ
Dcdc5 Gene Detail
Summary
  • Symbol
    Dcdc5
  • Name
    doublecortin domain containing 5
  • Synonyms
    4732421G10Rik, EG436559
Location &
Maps
more
  • Sequence Map
    Chr2:106080864-106408603 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 55.58 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2424 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045363
protein coding gene Chr2:106003336-106408603 (.)
129S1/SvImJ MGP_129S1SvImJ_G0039869
pseudogene Chr2:108190678-108624230 (+)
A/J MGP_AJ_G0039875
pseudogene Chr2:103682111-104086485 (+)
AKR/J MGP_AKRJ_G0039799
pseudogene Chr2:106517397-106940582 (+)
BALB/cJ MGP_BALBcJ_G0039852
pseudogene Chr2:103954208-104367961 (+)
C3H/HeJ MGP_C3HHeJ_G0039498
pseudogene Chr2:106813682-107262517 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040418
pseudogene Chr2:111700527-112142005 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0037013
pseudogene Chr2:99470213-99872306 (+)
CAST/EiJ MGP_CASTEiJ_G0038604
pseudogene Chr2:107334630-107758697 (+)
CBA/J MGP_CBAJ_G0039466
pseudogene Chr2:115593901-116057496 (+)
DBA/2J MGP_DBA2J_G0039670
pseudogene Chr2:103233926-103642549 (+)
FVB/NJ MGP_FVBNJ_G0039628
pseudogene Chr2:102197996-102592478 (+)
LP/J MGP_LPJ_G0039708
pseudogene Chr2:108353457-108794626 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039625
pseudogene Chr2:119432791-119880242 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040518
pseudogene Chr2:106698488-107128575 (+)
PWK/PhJ MGP_PWKPhJ_G0038277
pseudogene Chr2:102754911-103180444 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038021
pseudogene Chr2:105941927-106371216 (+)
WSB/EiJ MGP_WSBEiJ_G0038835
pseudogene Chr2:107431704-107856658 (+)



Homology
more
  • Human Ortholog
    DCDC5, doublecortin domain containing 5
  • Vertebrate Orthologs
    6
  • Human Ortholog
    DCDC5, doublecortin domain containing 5
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 100506627

  • Chr Location
    chr11:30863603-30992686 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 329482 NCBI Gene Model | MGI Sequence Detail 327740 C57BL/6J ±  kb
transcript AK132215 GenBank | EMBL | DDBJ | MGI Sequence Detail 3822 C57BL/6J  
polypeptide A2BHQ5 UniProt | EBI | MGI Sequence Detail 186 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR036572 Doublecortin domain superfamily
Molecular
Reagents
less
  • All nucleic 9
    cDNA 7
    Other 2

    Microarray probesets 2
Other
Accession IDs
less
MGI:3041252, MGI:3648853
References
more
  • Summaries
    All 20
    Developmental Gene Expression 2
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/04/2018
MGI 6.13
The Jackson Laboratory