About   Help   FAQ
BC049739 Gene Detail
Summary
  • Symbol
    BC049739
  • Name
    cDNA sequence BC049739
  • Feature Type
    lincRNA gene
  • IDs
    MGI:3039568
    NCBI Gene: 407791
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:32751629-32752288 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    61 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3039568
lincRNA gene Chr6:32751629-32752288 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006933
lincRNA gene Chr6:30756903-30757561 (-)
A/J MGP_AJ_G0006927
lincRNA gene Chr6:29429039-29429697 (-)
AKR/J MGP_AKRJ_G0006897
lincRNA gene Chr6:30421262-30421920 (-)
BALB/cJ MGP_BALBcJ_G0006903
lincRNA gene Chr6:29560204-29560862 (-)
C3H/HeJ MGP_C3HHeJ_G0006848
lincRNA gene Chr6:30395605-30396263 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007068
lincRNA gene Chr6:31549777-31550436 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006315
lincRNA gene Chr6:27566047-27566731 (-)
CAST/EiJ MGP_CASTEiJ_G0006765
lincRNA gene Chr6:30193941-30194600 (-)
CBA/J MGP_CBAJ_G0006830
lincRNA gene Chr6:32752871-32753529 (-)
DBA/2J MGP_DBA2J_G0006850
lincRNA gene Chr6:29332781-29333439 (-)
FVB/NJ MGP_FVBNJ_G0006873
lincRNA gene Chr6:29121605-29122264 (-)
LP/J MGP_LPJ_G0006933
lincRNA gene Chr6:30891948-30892606 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006854
lincRNA gene Chr6:35118971-35119629 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007070
lincRNA gene Chr6:30304764-30305422 (-)
PWK/PhJ MGP_PWKPhJ_G0006707
lincRNA gene Chr6:28914062-28914721 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006615
lincRNA gene Chr6:29988373-29989030 (-)
WSB/EiJ MGP_WSBEiJ_G0006820
lincRNA gene Chr6:30234536-30235195 (-)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106873 Ensembl Gene Model | MGI Sequence Detail 660 C57BL/6J ±  kb
transcript ENSMUST00000202626 Ensembl | MGI Sequence Detail 660 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 7
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/18/2019
MGI 6.14
The Jackson Laboratory