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Olfr421-ps1 Pseudogene Detail
Summary
  • Symbol
    Olfr421-ps1
  • Name
    olfactory receptor 421, pseudogene 1
  • Synonyms
    GA_x6K02T2P20D-21002372-21001425, GA_x6K02T2P20D-21006310-21006124, MOR105-3, Olfr421, Olfr422-ps1
  • Feature Type
    polymorphic pseudogene
  • IDs
    MGI:3030255
    NCBI Gene: 258715
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr1:174151481-174152530 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 80.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    93 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030255
polymorphic pseudogene Chr1:174151481-174152530 (+)
129S1/SvImJ MGP_129S1SvImJ_G0009925
polymorphic pseudogene Chr1:180203447-180204496 (+)
A/J MGP_AJ_G0009910
polymorphic pseudogene Chr1:172897089-172898138 (+)
AKR/J MGP_AKRJ_G0009895
polymorphic pseudogene Chr1:178110158-178111207 (+)
BALB/cJ MGP_BALBcJ_G0009895
polymorphic pseudogene Chr1:173418682-173419731 (+)
C3H/HeJ MGP_C3HHeJ_G0009827
polymorphic pseudogene Chr1:178731962-178733011 (+)
C57BL/6NJ MGP_C57BL6NJ_G0010139
polymorphic pseudogene Chr1:186249329-186250378 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0008941
polymorphic pseudogene Chr1:164357544-164358593 (+)
CAST/EiJ MGP_CASTEiJ_G0009645
polymorphic pseudogene Chr1:178087172-178088221 (+)
CBA/J MGP_CBAJ_G0009801
polymorphic pseudogene Chr1:192962686-192963735 (+)
DBA/2J MGP_DBA2J_G0009828
polymorphic pseudogene Chr1:171832811-171833860 (+)
FVB/NJ MGP_FVBNJ_G0009845
polymorphic pseudogene Chr1:169919231-169920280 (+)
LP/J MGP_LPJ_G0009922
polymorphic pseudogene Chr1:181306610-181307659 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0009812
polymorphic pseudogene Chr1:200160784-200161833 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0010112
polymorphic pseudogene Chr1:177929442-177930491 (+)
PWK/PhJ MGP_PWKPhJ_G0009568
polymorphic pseudogene Chr1:170914388-170915437 (+)
SPRET/EiJ MGP_SPRETEiJ_G0009401
polymorphic pseudogene Chr1:176937677-176938726 (+)
WSB/EiJ MGP_WSBEiJ_G0009749
polymorphic pseudogene Chr1:178083339-178084388 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258715 NCBI Gene Model | MGI Sequence Detail 1050 C57BL/6J ±  kb
transcript NM_146720 RefSeq | MGI Sequence Detail 1050 Not Specified  
polypeptide NP_666931 RefSeq | MGI Sequence Detail 315 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:3030256
References
more
  • Summaries
    All 15
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory