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Olfr396-ps1 Pseudogene Detail
Summary
  • Symbol
    Olfr396-ps1
  • Name
    olfactory receptor 396, pseudogene 1
  • Synonyms
    GA_x6K02T2P1NL-4083149-4084087, MOR135-19
  • Feature Type
    polymorphic pseudogene
  • IDs
    MGI:3030230
    NCBI Gene: 258208
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr11:73928007-73928942 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 45.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    14 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030230
polymorphic pseudogene Chr11:73925002-73929568 (+)
129S1/SvImJ MGP_129S1SvImJ_G0009931
polymorphic pseudogene Chr11:74616446-74620390 (+)
A/J MGP_AJ_G0009916
polymorphic pseudogene Chr11:71845268-71849252 (+)
AKR/J MGP_AKRJ_G0009900
polymorphic pseudogene Chr11:74003425-74007369 (+)
BALB/cJ MGP_BALBcJ_G0009901
polymorphic pseudogene Chr11:72125882-72130306 (+)
C3H/HeJ MGP_C3HHeJ_G0009833
polymorphic pseudogene Chr11:74003293-74007237 (+)
C57BL/6NJ MGP_C57BL6NJ_G0010146
polymorphic pseudogene Chr11:76920819-76924762 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0008945
polymorphic pseudogene Chr11:68866988-68941140 (+)
CAST/EiJ MGP_CASTEiJ_G0009650
polymorphic pseudogene Chr11:74385386-74390420 (+)
CBA/J MGP_CBAJ_G0009807
polymorphic pseudogene Chr11:80278018-80281962 (+)
DBA/2J MGP_DBA2J_G0009834
polymorphic pseudogene Chr11:71440105-71443948 (+)
FVB/NJ MGP_FVBNJ_G0009851
polymorphic pseudogene Chr11:70991125-70995068 (+)
LP/J MGP_LPJ_G0009928
polymorphic pseudogene Chr11:75129993-75133937 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0009817
polymorphic pseudogene Chr11:80836509-80841466 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0010119
polymorphic pseudogene Chr11:74222194-74226178 (+)
PWK/PhJ MGP_PWKPhJ_G0009573
polymorphic pseudogene Chr11:72130750-72134742 (+)
SPRET/EiJ MGP_SPRETEiJ_G0009406
polymorphic pseudogene Chr11:73803162-73807132 (+)
WSB/EiJ MGP_WSBEiJ_G0009754
polymorphic pseudogene Chr11:73988683-73993261 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 258208 NCBI Gene Model | MGI Sequence Detail 936 C57BL/6J ±  kb
polypeptide A0A0U1RNF5 UniProt | EBI | MGI Sequence Detail 211 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
References
more
  • Summaries
    All 11
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:88213 Young JM, et al., Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Genome Biol. 2003;4(11):R71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory