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4933427D06Rik Gene Detail
Summary
  • Symbol
    4933427D06Rik
  • Name
    RIKEN cDNA 4933427D06 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3026922
    NCBI Gene: 232217
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:89096110-89110039 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 39.79 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    165 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3026922
lncRNA gene Chr6:88950683-89110039 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031018
protein coding gene Chr6:90367837-90538574 (+)
A/J MGP_AJ_G0030984
protein coding gene Chr6:87049007-87062902 (+)
AKR/J MGP_AKRJ_G0030915
protein coding gene Chr6:89530736-89544416 (+)
BALB/cJ MGP_BALBcJ_G0030997
protein coding gene Chr6:87032273-87046204 (+)
C3H/HeJ MGP_C3HHeJ_G0030713
protein coding gene Chr6:94895299-94909526 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031454
protein coding gene Chr6:92785513-92956164 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028635
protein coding gene Chr6:85202391-85209460 (+)
CAST/EiJ MGP_CASTEiJ_G0030106
protein coding gene Chr6:89651203-89666644 (+)
CBA/J MGP_CBAJ_G0030681
protein coding gene Chr6:96469596-96483504 (+)
DBA/2J MGP_DBA2J_G0030837
protein coding gene Chr6:86322606-86336448 (+)
FVB/NJ MGP_FVBNJ_G0030790
protein coding gene Chr6:85375473-85535414 (+)
LP/J MGP_LPJ_G0030914
protein coding gene Chr6:90404604-90566512 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030823
protein coding gene Chr6:100454115-100621337 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031481
protein coding gene Chr6:89242462-89411317 (+)
PWK/PhJ MGP_PWKPhJ_G0029821
protein coding gene Chr6:85303944-85318381 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029649
protein coding gene Chr6:88056311-88222321 (+)
WSB/EiJ MGP_WSBEiJ_G0030187
protein coding gene Chr6:89845567-89860824 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 232217 NCBI Gene Model | MGI Sequence Detail 13930 C57BL/6J ±  kb
transcript NR_134977 RefSeq | MGI Sequence Detail 2727 C57BL/6  
polypeptide Q8CDD1 UniProt | EBI | MGI Sequence Detail 203 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR031439 Proline-rich protein family 20
Molecular
Reagents
less
  • All nucleic 21
    cDNA 21

    Microarray probesets 2
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/22/2020
MGI 6.16
The Jackson Laboratory