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Platr26 Gene Detail
Summary
  • Symbol
    Platr26
  • Name
    pluripotency associated transcript 26
  • Synonyms
    Gm1631, LOC381371
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2686477
    NCBI Gene: 381371
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:71719417-71730966 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 42.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    138 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686477
lncRNA gene Chr2:71719417-71730966 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005929
lincRNA gene Chr2:71875641-71889171 (+)
A/J MGP_AJ_G0005922
lincRNA gene Chr2:69051973-69063454 (+)
AKR/J MGP_AKRJ_G0005897
lincRNA gene Chr2:70956909-70970157 (+)
BALB/cJ MGP_BALBcJ_G0005900
lincRNA gene Chr2:69250982-69262686 (+)
C3H/HeJ MGP_C3HHeJ_G0005848
lincRNA gene Chr2:71166720-71179298 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006061
lincRNA gene Chr2:74043995-74055398 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005394
lincRNA gene Chr2:66272681-66284054 (+)
CAST/EiJ MGP_CASTEiJ_G0005784
lincRNA gene Chr2:71365106-71377679 (+)
CBA/J MGP_CBAJ_G0005833
lincRNA gene Chr2:76751523-76762966 (+)
DBA/2J MGP_DBA2J_G0005854
lincRNA gene Chr2:68687602-68699272 (+)
FVB/NJ MGP_FVBNJ_G0005879
lincRNA gene Chr2:68082111-68093571 (+)
LP/J MGP_LPJ_G0005933
lincRNA gene Chr2:71762635-71775486 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005867
lincRNA gene Chr2:78742532-78753927 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006058
lincRNA gene Chr2:71056344-71067775 (+)
PWK/PhJ MGP_PWKPhJ_G0005733
lincRNA gene Chr2:68566138-68578604 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005645
lincRNA gene Chr2:71245080-71256735 (+)
WSB/EiJ MGP_WSBEiJ_G0005837
lincRNA gene Chr2:71494434-71505847 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 381371 NCBI Gene Model | MGI Sequence Detail 11550 C57BL/6J ±  kb
transcript NR_037979 RefSeq | MGI Sequence Detail 643 C57BL/6  
polypeptide Q6R5G4 UniProt | EBI | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 18
    Phenotypes 8
  • Earliest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
  • Latest
    J:241492 Bergmann JH, et al., Regulation of the ESC transcriptome by nuclear long noncoding RNAs. Genome Res. 2015 Sep;25(9):1336-46

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory