Atg9b
Gene Detail

Symbol Name ID

Atg9b autophagy related 9B MGI:2685420

Synonyms

Apg9l2, eONE, LOC213948, Nos3as

Feature Type

protein coding gene

Genetic Map

Chromosome 5

11.49 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr5:24384181-24392143 bp, - strand From VEGA annotation of GRCm38   7963 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:72638  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Atg9b

Human homologs

Human Homolog		ATG9B, autophagy related 9B
NCBI Gene ID		285973
neXtProt AC		NX_Q674R7
Human Synonyms		APG9L2, NOS3AS, SONE
Human Chr (Location)		7q36.1; chr7:150709297-150721586 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(6) : Targeted(2) Gene trapped(4)

Gene Ontology (GO) classifications

All GO classifications: (8 annotations)

Process	autophagic vacuole assembly, autophagy
Component	autophagic vacuole, cytoplasm, ...
Function	molecular_function

External Resources: FuncBase

Expression

cDNA source data(3)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(4) cDNA(3) Other(1)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000024105 (Evidence)
Ensembl Gene Model	ENSMUSG00000038295 (Evidence)
Entrez Gene	213948 (Evidence)
NIA Mouse Gene Index	U025992
Consensus CDS Project	CCDS39027.1
International Mouse Knockout Project Status	Atg9b

Sequences

Length	Strain/Species
genomic	OTTMUSG00000024105	VEGA Gene Model | MGI Sequence Detail	7963	C57BL/6J
transcript	OTTMUST00000058962	VEGA | MGI Sequence Detail	3902	Not Applicable
polypeptide	OTTMUSP00000028643	VEGA | MGI Sequence Detail	922	Not Applicable

All sequences(23) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(28 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR007241	Autophagy-related protein 9
Protein Ontology	PR:000004421	autophagy-related protein 9B

References

(Earliest) J:96017 Robb GB, et al., Post-transcriptional regulation of endothelial nitric-oxide synthase by an overlapping antisense mRNA transcript. J Biol Chem. 2004 Sep 3;279(36):37982-96
(Latest) J:186989 Nicola AM, et al., Macrophage Autophagy in Immunity to Cryptococcus neoformans and Candida albicans. Infect Immun. 2012 Sep;80(9):3065-76
All references(27)