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Ccdc9b Gene Detail
Summary
  • Symbol
    Ccdc9b
  • Name
    coiled-coil domain containing 9B
  • Synonyms
    A430105I19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685199
    NCBI Gene: 214239
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr2:118754158-118762661 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      8504 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 59.45 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CCDC9B, coiled-coil domain containing 9B
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC9B, coiled-coil domain containing 9B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C15orf52
  • Links
    NCBI Gene ID: 388115
    neXtProt AC: NX_Q6ZUT6
    UniProt: Q6ZUT6

  • Chr Location
    15q15.1; chr15:40331452-40340967 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Targeted
    5
  • Genomic Mutations
    2 involving Ccdc9b
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015637 VEGA Gene Model | MGI Sequence Detail 8504 C57BL/6J ±  kb
transcript OTTMUST00000037147 VEGA | MGI Sequence Detail 4703 Not Applicable  
polypeptide OTTMUSP00000016651 VEGA | MGI Sequence Detail 545 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    93 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR029336 Protein of unknown function DUF4594
Molecular
Reagents
less
  • All nucleic 13
    cDNA 12
    Other 1

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Phenotypes 8
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/10/2018
MGI 6.12
The Jackson Laboratory