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Macc1
Gene Detail
Symbol

Name
ID
Macc1
metastasis associated in colon cancer 1
MGI:2685113
Synonyms
4732474O15Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 12
63.48 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr12:119443410-119466934 bp, + strand
From VEGA annotation of GRCm38

  23525 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18813  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: MACC1
Gene Tree: Macc1

Human
homologs
MACC1, metastasis associated in colon cancer 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 346389
neXtProt AC: NX_Q6ZN28

Human Synonyms: 7A5, SH3BP4L

Human Chr (Location): 7p21.1; chr7:20134655-20217390 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Macc1 interacts with 237 markers (Mir10a, Mir10b, Mir15a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase macc1 ; ZFIN macc1    NEW 
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000045335 (Evidence)
Ensembl Gene Model ENSMUSG00000041886 (Evidence)
Entrez Gene 238455 (Evidence)
UniGene 31376
DFCI TC1611409
DoTS DT.94381770
NIA Mouse Gene Index U014499
Consensus CDS Project CCDS49199.1
International Mouse Phenotyping Consortium Status Macc1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000045335 VEGA Gene Model | MGI Sequence Detail 23525 C57BL/6J ±  kb
transcript OTTMUST00000119050 VEGA | MGI Sequence Detail 3818 Not Applicable 
polypeptide OTTMUSP00000066353 VEGA | MGI Sequence Detail 851 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(10) UniProt(2)
Polymorphisms
SNPs within 2kb(187 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001452 Src homology-3 domain
InterPro IPR011511 Variant SH3
Protein Ontology PR:000010036 metastasis-associated in colon cancer protein 1
References
(Earliest) J:23000 MGD Nomenclature Committee, 2/14/1995;
(Latest) J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;
All references(20)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory