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Zbed4 Gene Detail
Summary
  • Symbol
    Zbed4
  • Name
    zinc finger, BED type containing 4
  • Synonyms
    1700009F06Rik, MGC:59429
  • Feature Type
    protein coding gene
  • IDs
    MGI:2682302
    NCBI Gene: 223773
Location & Maps
more
  • Sequence Map
    Chr15:88751660-88784516 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      32857 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 44.24 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ZBED4, zinc finger BED-type containing 4
  • Vertebrate Orthologs
    2
  • Human Ortholog
    ZBED4, zinc finger BED-type containing 4
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 9889
    neXtProt AC: NX_O75132

  • Chr Location
    22q13.33; chr22:49853849-49890078 (+)  GRCh38.p2

Human Diseases
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  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    27 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    16
  • Chemically induced (other)
    1
  • Gene trapped
    11
  • Radiation induced
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Zbed4
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017462 VEGA Gene Model | MGI Sequence Detail 32857 C57BL/6J ±  kb
transcript OTTMUST00000042403 VEGA | MGI Sequence Detail 5425 Not Applicable  
polypeptide OTTMUSP00000019054 VEGA | MGI Sequence Detail 1168 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    26 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000032080 zinc finger BED domain-containing protein 4
  • InterPro Domains
    IPR008906 HAT, C-terminal dimerisation domain
    IPR012337 Ribonuclease H-like domain
    IPR003656 Zinc finger, BED-type
Molecular
Reagents
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  • All nucleic 9
    cDNA 8
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
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MGI:1922716
References
more
  • Summaries
    All 38
    Developmental Gene Expression 3
    Diseases 1
    Gene Ontology 5
    Phenotypes 27
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:179521 Saghizadeh M, et al., ZBED4, a cone and Muller cell protein in human retina, has a different cellular expression in mouse. Mol Vis. 2011;17:2011-8

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory