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Zbed4 Gene Detail
Summary
  • Symbol
    Zbed4
  • Name
    zinc finger, BED type containing 4
  • Synonyms
    1700009F06Rik, MGC:59429
  • Feature Type
    protein coding gene
  • IDs
    MGI:2682302
    NCBI Gene: 223773
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr15:88751666-88784516 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 44.24 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2682302
protein coding gene Chr15:88751660-88784516 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022207
protein coding gene Chr15:89897197-89922156 (+)
A/J MGP_AJ_G0022166
protein coding gene Chr15:86474903-86493501 (+)
AKR/J MGP_AKRJ_G0022141
protein coding gene Chr15:89036339-89056317 (+)
BALB/cJ MGP_BALBcJ_G0022172
protein coding gene Chr15:86577265-86596430 (+)
C3H/HeJ MGP_C3HHeJ_G0021942
protein coding gene Chr15:89000638-89027389 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022617
protein coding gene Chr15:93166874-93188317 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020142
protein coding gene Chr15:82711950-82726727 (+)
CAST/EiJ MGP_CASTEiJ_G0021464
protein coding gene Chr15:89792136-89815618 (+)
CBA/J MGP_CBAJ_G0021909
protein coding gene Chr15:96320637-96353454 (+)
DBA/2J MGP_DBA2J_G0022036
protein coding gene Chr15:85906720-85926755 (+)
FVB/NJ MGP_FVBNJ_G0022015
protein coding gene Chr15:84984606-85003215 (+)
LP/J MGP_LPJ_G0022107
protein coding gene Chr15:90050233-90073075 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022035
protein coding gene Chr15:100768583-100793428 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022632
protein coding gene Chr15:89051785-89072854 (+)
PWK/PhJ MGP_PWKPhJ_G0021205
protein coding gene Chr15:85968798-85987819 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021039
protein coding gene Chr15:88808222-88825580 (+)
WSB/EiJ MGP_WSBEiJ_G0021513
protein coding gene Chr15:89543302-89564831 (+)



Homology
more
  • Human Ortholog
    ZBED4, zinc finger BED-type containing 4
  • Vertebrate Orthologs
    2
  • Human Ortholog
    ZBED4, zinc finger BED-type containing 4
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 9889
    neXtProt AC: NX_O75132
    UniProt: O75132

  • Chr Location
    22q13.33; chr22:49853849-49890078 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    27 phenotype references
  • All Mutations and Alleles
    16
  • Chemically induced (other)
    1
  • Gene trapped
    11
  • Radiation induced
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Zbed4
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 223773 NCBI Gene Model | MGI Sequence Detail 32851 C57BL/6J ±  kb
transcript NM_181412 RefSeq | MGI Sequence Detail 5403 C57BL/6  
polypeptide Q80WQ9 UniProt | EBI | MGI Sequence Detail 1168 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1922716
References
more
  • Summaries
    All 57
    Developmental Gene Expression 4
    Diseases 1
    Gene Ontology 4
    Phenotypes 27
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory