Slc9a9
Gene Detail

Symbol Name ID

Slc9a9 solute carrier family 9 (sodium/hydrogen exchanger), member 9 MGI:2679732

Synonyms

5730527A11Rik, Nhe9

Feature Type

protein coding gene

Genetic Map

Chromosome 9

49.22 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr9:94669909-95230445 bp, + strand From VEGA annotation of GRCm38   560537 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:69753  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Slc9a9

Human homologs

Human Homolog		SLC9A9, solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9
NCBI Gene ID		285195
neXtProt AC		NX_Q8IVB4
Human Synonyms		AUTS16, NHE9
Human Chr (Location)		3q24; chr3:142984064-143567373 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human SLC9A9

Alleles and phenotypes

All alleles(5) : Targeted(3) Gene trapped(2)

Gene Ontology (GO) classifications

All GO classifications: (17 annotations)

Process	cation transport, ion transmembrane transport, ...
Component	endosome, integral to membrane, ...
Function	antiporter activity, sodium:hydrogen antiporter activity, ...

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (139)    Tissues (107)    Images (23)
Theiler Stages: 20, 22, 23

Assay Type	Results
RNA in situ	139

cDNA source data(28)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(30) cDNA(28) Primer pair(1) Other(1)
Microarray probesets(6)

Other database links

VEGA Gene Model	OTTMUSG00000032832 (Evidence)
Ensembl Gene Model	ENSMUSG00000031129 (Evidence)
Entrez Gene	331004 (Evidence)
UniGene	326125
DFCI	TC1579688, TC1716494, TC1730580
DoTS	DT.55130694, DT.91332432, DT.94172130, DT.97393909
NIA Mouse Gene Index	U010859
Consensus CDS Project	CCDS40726.1
International Mouse Knockout Project Status	Slc9a9

Sequences

Length	Strain/Species
genomic	OTTMUSG00000032832	VEGA Gene Model | MGI Sequence Detail	560537	C57BL/6J
transcript	OTTMUST00000081766	VEGA | MGI Sequence Detail	3468	Not Applicable
polypeptide	OTTMUSP00000043785	VEGA | MGI Sequence Detail	644	Not Applicable

All sequences(35) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(2845 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR006153	Cation/H+ exchanger
InterPro	IPR018422	Cation/H+ exchanger, CPA1 family
InterPro	IPR004709	Na+/H+ exchanger
InterPro	IPR002090	Na+/H+ exchanger, isoform 6 (NHE6)
Protein Ontology	PR:000015221	sodium/hydrogen exchanger 9

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(35)

Other accession IDs

MGI:1917898, MGI:2143161