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Hist2h3c1 Gene Detail
Summary
  • Symbol
    Hist2h3c1
  • Name
    histone cluster 2, H3c1
  • Synonyms
    H3-615, H3f2, Hist2h3ca1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448355
    NCBI Gene: 15077
  • Gene Overview
    MyGene.info: HIST1H3C
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:96246685-96247348 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 41.69 cM, cytoband F1-F2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3 from dbSNP Build 142
  • Strain Annotations
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448355
protein coding gene Chr3:96246685-96248509 (.)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0026768
protein coding gene Chr3:95812557-95815558 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    HIST1H3C, histone cluster 1 H3 family member c
  • Vertebrate Orthologs
    8
  • Human Ortholog
    HIST1H3C, histone cluster 1 H3 family member c
    Orthology source: HomoloGene
  • Synonyms
    H3.1, H3/c, H3FC
  • Links
    NCBI Gene ID: 8352
    neXtProt AC: NX_P68431
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26045411-26045869 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Hist2h3c1
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 15077 NCBI Gene Model | MGI Sequence Detail 664 C57BL/6J ±  kb
transcript NM_178216 RefSeq | MGI Sequence Detail 664 C57BL/6  
polypeptide NP_835734 RefSeq | MGI Sequence Detail 136 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 4
Other
Accession IDs
less
MGI:1194885, MGI:3035157
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:7225 Sittman DB, et al., Structure of a cluster of mouse histone genes. Nucleic Acids Res. 1983 Oct 11;11(19):6679-97
  • Latest
    J:177918 Quille ML, et al., High-throughput analysis of promoter occupancy reveals new targets for Arx, a gene mutated in mental retardation and interneuronopathies. PLoS One. 2011;6(9):e25181

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory