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Ntm Gene Detail
Summary
  • Symbol
    Ntm
  • Name
    neurotrimin
  • Synonyms
    6230410L23Rik, B230210G24Rik, Hnt
  • Feature Type
    protein coding gene
  • IDs
    MGI:2446259
    NCBI Gene: 235106
  • Gene Overview
    MyGene.info: NTM
  • Alliance
  • Transcription Start Sites
    21 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:28994750-29963141 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 14.38 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    6339 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2446259
protein coding gene Chr9:28994750-29963486 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034511
protein coding gene Chr9:26547710-27561539 (-)
A/J MGP_AJ_G0034489
protein coding gene Chr9:25930222-26905781 (-)
AKR/J MGP_AKRJ_G0034415
protein coding gene Chr9:26447841-27454002 (-)
BALB/cJ MGP_BALBcJ_G0034480
protein coding gene Chr9:25836812-26831246 (-)
C3H/HeJ MGP_C3HHeJ_G0034192
protein coding gene Chr9:26817532-27810871 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035001
protein coding gene Chr9:27519723-28534289 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031931
protein coding gene Chr9:24815817-25774215 (-)
CAST/EiJ MGP_CASTEiJ_G0033515
protein coding gene Chr9:26660374-27675770 (-)
CBA/J MGP_CBAJ_G0034165
protein coding gene Chr9:28417638-29449677 (-)
DBA/2J MGP_DBA2J_G0034323
protein coding gene Chr9:25947324-26921209 (-)
FVB/NJ MGP_FVBNJ_G0034266
protein coding gene Chr9:25375178-26344965 (-)
LP/J MGP_LPJ_G0034409
protein coding gene Chr9:26722702-27742581 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034310
protein coding gene Chr9:30121957-31159465 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035021
protein coding gene Chr9:26465343-27470416 (-)
PWK/PhJ MGP_PWKPhJ_G0033220
protein coding gene Chr9:25881320-26860822 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033054
protein coding gene Chr9:26537922-27549802 (-)
WSB/EiJ MGP_WSBEiJ_G0033630
protein coding gene Chr9:26208034-27194925 (-)



Homology
more
  • Human Ortholog
    NTM, neurotrimin
  • Vertebrate Orthologs
    9
  • Human Ortholog
    NTM, neurotrimin
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CEPU-1, HNT, IGLON2, NTRI
  • Links
    NCBI Gene ID: 50863
    neXtProt AC: NX_Q9P121
    UniProt: Q9P121

  • Chr Location
    11q25; chr11:131370326-132336822 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41139
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NTM
  • Gene Tree
    Ntm
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059974 Ensembl Gene Model | MGI Sequence Detail 968392 C57BL/6J ±  kb
transcript ENSMUST00000075069 Ensembl | MGI Sequence Detail 3022 Not Applicable  
polypeptide ENSMUSP00000074578 Ensembl | MGI Sequence Detail 344 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    cDNA 16
    Primer pair 1
    Other 1

    Microarray probesets 8
Other
Accession IDs
less
MGI:1915534, MGI:1923369, MGI:2143451
References
more
  • Summaries
    All 39
    Developmental Gene Expression 10
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:264914 Vanaveski T, et al., Promoter-Specific Expression and Genomic Structure of IgLON Family Genes in Mouse. Front Neurosci. 2017;11:38

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory