Trappc11
Gene Detail

Symbol Name ID

Trappc11 trafficking protein particle complex 11 MGI:2444585

Synonyms

D030016E14Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 8

26.86 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr8:47490115-47533470 bp, - strand From VEGA annotation of GRCm38   43356 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:11076  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Trappc11

Human homologs

Human Homolog		TRAPPC11, trafficking protein particle complex 11
NCBI Gene ID		60684
neXtProt AC		NX_Q7Z392
Human Synonyms		C4orf41, FOIGR, GRY
Human Chr (Location)		4q35.1; chr4:184580420-184634747 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(3) : Gene trapped(3)

Gene Ontology (GO) classifications

All GO classifications: (4 annotations)

Process	transport, vesicle-mediated transport
Component	Golgi apparatus
Function	molecular_function

External Resources: FuncBase

Expression

cDNA source data(93)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(93) cDNA(93)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000028479 (Evidence)
Ensembl Gene Model	ENSMUSG00000038102 (Evidence)
Entrez Gene	320714 (Evidence)
UniGene	39461
DFCI	TC1591312, TC1597753, TC1601070, TC1603031
DoTS	DT.101322044, DT.101383855, DT.101721533, DT.87068577, DT.94307712
NIA Mouse Gene Index	U029796
Consensus CDS Project	CCDS22296.1
International Mouse Knockout Project Status	Trappc11

Sequences

Length	Strain/Species
genomic	OTTMUSG00000028479	VEGA Gene Model | MGI Sequence Detail	43356	C57BL/6J
transcript	OTTMUST00000070576	VEGA | MGI Sequence Detail	4332	Not Applicable
polypeptide	OTTMUSP00000035992	VEGA | MGI Sequence Detail	1133	Not Applicable

All sequences(47) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(396 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR021773	Foie gras liver health family 1
InterPro	IPR025876	Trafficking protein particle complex subunit 11, C-terminal domain
Protein Ontology	PR:000031520	trafficking protein particle complex subunit 11

References

(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
All references(25)

Other accession IDs

MGI:2142812, MGI:2142898