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Trappc11 Gene Detail
Summary
  • Symbol
    Trappc11
  • Name
    trafficking protein particle complex 11
  • Synonyms
    D030016E14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444585
    NCBI Gene: 320714
Location & Maps
more
  • Sequence Map
    Chr8:47490115-47533470 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      43356 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    TRAPPC11, trafficking protein particle complex 11
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TRAPPC11, trafficking protein particle complex 11
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C4orf41, FOIGR, GRY, LGMD2S
  • Links
    NCBI Gene ID: 60684
    neXtProt AC: NX_Q7Z392

  • Chr Location
    4q35.1; chr4:183659267-183713594 (+)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human TRAPPC11 associations

Human Disease Mouse Models
       Muscular Dystrophy, Limb-Girdle, Type 2s; LGMD2S   OMIM: 615356
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    3
  • Genomic Mutations
    1 involving Trappc11
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028479 VEGA Gene Model | MGI Sequence Detail 43356 C57BL/6J ±  kb
transcript OTTMUST00000070576 VEGA | MGI Sequence Detail 4332 Not Applicable  
polypeptide OTTMUSP00000035992 VEGA | MGI Sequence Detail 1133 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    413 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000031520 trafficking protein particle complex subunit 11
  • InterPro Domains
    IPR021773 Foie gras liver health family 1
    IPR025876 Trafficking protein particle complex subunit 11, C-terminal
Molecular
Reagents
less
  • All nucleic 93
    cDNA 93

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142812, MGI:2142898
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory