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Glt28d2
Gene Detail
Symbol

Name
ID
Glt28d2
glycosyltransferase 28 domain containing 2
MGI:2443773
Synonyms
4732486J07Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 3
37.83 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr3:85801047-85887518 bp, - strand
From VEGA annotation of GRCm38

  86472 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:44843  Vertebrate Homology Class
1 mouse; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: glycosyltransferase
Gene Tree: Glt28d2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Glt28d2 interacts with 214 markers (Mir1a-1, Mir1a-2, Mir10a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Process biological_process
Component cellular_component
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (112)    Tissues (112)    Images (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 112
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(8) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000032731 (Evidence)
Ensembl Gene ModelENSMUSG00000031286 (Evidence)
Entrez Gene320302 (Evidence)
UniGene482978
DFCITC1619748, TC1586637
DoTSDT.101364577, DT.60101306
Consensus CDS ProjectCCDS17443.1
International Mouse Knockout Project StatusGlt28d2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000032731 VEGA Gene Model | MGI Sequence Detail 86472 C57BL/6J ±  kb
transcript OTTMUST00000081431 VEGA | MGI Sequence Detail 2732 Not Applicable 
polypeptide OTTMUSP00000043572 VEGA | MGI Sequence Detail 165 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(2) UniProt(6)
Polymorphisms
SNPs within 2kb(665 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007235 Glycosyl transferase, family 28, C-terminal
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(21)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory