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Gatad2b Gene Detail
Summary
  • Symbol
    Gatad2b
  • Name
    GATA zinc finger domain containing 2B
  • Synonyms
    C430014D17Rik, p66beta
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443225
    NCBI Gene: 229542
  • Gene Overview
    MyGene.info: GATAD2B
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:90293285-90363405 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 39.21 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    160 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443225
protein coding gene Chr3:90293178-90363407 (.)
129S1/SvImJ MGP_129S1SvImJ_G0027461
protein coding gene Chr3:90589634-90669538 (+)
A/J MGP_AJ_G0027425
protein coding gene Chr3:87577675-87651489 (+)
AKR/J MGP_AKRJ_G0027390
protein coding gene Chr3:89724550-89806239 (+)
BALB/cJ MGP_BALBcJ_G0027434
protein coding gene Chr3:87537076-87609143 (+)
C3H/HeJ MGP_C3HHeJ_G0027176
protein coding gene Chr3:89893416-89968364 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027880
protein coding gene Chr3:93996610-94076096 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025233
protein coding gene Chr3:83074498-83146831 (+)
CAST/EiJ MGP_CASTEiJ_G0026622
protein coding gene Chr3:90275558-90351597 (+)
CBA/J MGP_CBAJ_G0027151
protein coding gene Chr3:97231875-97302790 (+)
DBA/2J MGP_DBA2J_G0027288
protein coding gene Chr3:86947787-87020428 (+)
FVB/NJ MGP_FVBNJ_G0027256
protein coding gene Chr3:85283264-85354413 (+)
LP/J MGP_LPJ_G0027397
protein coding gene Chr3:91659413-91733741 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027277
protein coding gene Chr3:103444881-103519292 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027939
protein coding gene Chr3:89478053-89551784 (+)
PWK/PhJ MGP_PWKPhJ_G0026356
protein coding gene Chr3:86836140-86909359 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026176
protein coding gene Chr3:88659546-88731333 (+)
WSB/EiJ MGP_WSBEiJ_G0026704
protein coding gene Chr3:89875483-89949511 (+)



Homology
more
  • Human Ortholog
    GATAD2B, GATA zinc finger domain containing 2B
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GATAD2B, GATA zinc finger domain containing 2B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MRD18, P66beta, p68
  • Links
    NCBI Gene ID: 57459
    neXtProt AC: NX_Q8WXI9
    UniProt: Q8WXI9

  • Chr Location
    1q21.3; chr1:153804725-153922975 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human GATAD2B associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 229542 NCBI Gene Model | MGI Sequence Detail 70121 C57BL/6J ±  kb
transcript NM_139304 RefSeq | MGI Sequence Detail 5355 C57BL/6  
polypeptide Q8VHR5 UniProt | EBI | MGI Sequence Detail 594 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 15
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:3034967
References
more
  • Summaries
    All 42
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 7
    Phenotypes 12
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:217391 Lin C, et al., Regulation of Sufu activity by p66beta and Mycbp provides new insight into vertebrate Hedgehog signaling. Genes Dev. 2014 Nov 15;28(22):2547-63

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory