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6430573F11Rik
Gene Detail
Symbol

Name
ID
6430573F11Rik
RIKEN cDNA 6430573F11 gene
MGI:2442328
Feature Type
protein coding gene
Genetic Map
Chromosome 8
23.05 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr8:36457548-36514320 bp, + strand
From VEGA annotation of GRCm38

  56773 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:35306  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: 6430573F11Rik

Human
homologs
Human Homolog KIAA1456, KIAA1456
NCBI Gene ID 57604
neXtProt AC  NX_Q9P272
Human Synonyms  C8orf79, TRM9L
Human Chr (Location)  8p22; chr8:12945674-13029777 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(2) Targeted(3)
Incidental mutations (data from APF )
Interactions
6430573F11Rik interacts with 243 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (69 annotations)
Process metabolic process, methylation
Component cellular_component
Function 1-hydroxy-6-methoxypyrene methyltransferase activity, 1-hydroxypyrene methyltransferase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (42)    Tissues (30)    Images (16)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 42
cDNA source data(15)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000027150 (Evidence)
Ensembl Gene ModelENSMUSG00000039620 (Evidence)
Entrez Gene319582 (Evidence)
UniGene180924
DFCITC1599586, TC1587150, TC1585102
DoTSDT.101723071, DT.101274920, DT.110873080, DT.55168072
NIA Mouse Gene IndexU009265
EC2.1.1.-
Consensus CDS ProjectCCDS22248.1
International Mouse Knockout Project Status6430573F11Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027150 VEGA Gene Model | MGI Sequence Detail 56773 C57BL/6J ±  kb
transcript OTTMUST00000067156 VEGA | MGI Sequence Detail 3570 Not Applicable 
polypeptide OTTMUSP00000033750 VEGA | MGI Sequence Detail 447 Not Applicable 

For the selected sequences
All sequences(53) RefSeq(14) UniProt(3)
Polymorphisms
SNPs within 2kb(801 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013216 Methyltransferase type 11
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory