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Rrnad1 Gene Detail
Summary
  • Symbol
    Rrnad1
  • Name
    ribosomal RNA adenine dimethylase domain containing 1
  • Synonyms
    BC023814, MGC:38548
  • Feature Type
    protein coding gene
  • IDs
    MGI:2387197
    NCBI Gene: 229503
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:87922601-87930582 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 38.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2387197
protein coding gene Chr3:87922601-87930717 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027374
protein coding gene Chr3:88054150-88062048 (-)
A/J MGP_AJ_G0027338
protein coding gene Chr3:85065366-85073263 (-)
AKR/J MGP_AKRJ_G0027304
protein coding gene Chr3:87159129-87167029 (-)
BALB/cJ MGP_BALBcJ_G0027347
protein coding gene Chr3:85159701-85167601 (-)
C3H/HeJ MGP_C3HHeJ_G0027090
protein coding gene Chr3:87429093-87436991 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027793
protein coding gene Chr3:91294875-91304319 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025146
protein coding gene Chr3:80687227-80695337 (-)
CAST/EiJ MGP_CASTEiJ_G0026537
protein coding gene Chr3:87635905-87643775 (-)
CBA/J MGP_CBAJ_G0027065
protein coding gene Chr3:94384778-94392676 (-)
DBA/2J MGP_DBA2J_G0027201
protein coding gene Chr3:84557007-84564907 (-)
FVB/NJ MGP_FVBNJ_G0027170
protein coding gene Chr3:82829688-82837586 (-)
LP/J MGP_LPJ_G0027309
protein coding gene Chr3:89016223-89024121 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027189
protein coding gene Chr3:100634179-100642077 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027851
protein coding gene Chr3:86907026-86914924 (-)
PWK/PhJ MGP_PWKPhJ_G0026270
protein coding gene Chr3:84351653-84360055 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026087
protein coding gene Chr3:86093122-86101003 (-)
WSB/EiJ MGP_WSBEiJ_G0026616
protein coding gene Chr3:87270669-87278566 (-)



Homology
more
  • Human Ortholog
    RRNAD1, ribosomal RNA adenine dimethylase domain containing 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    RRNAD1, ribosomal RNA adenine dimethylase domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf66, CGI-41, METTL25B
  • Links
    NCBI Gene ID: 51093
    neXtProt AC: NX_Q96FB5
    UniProt: Q96FB5

  • Chr Location
    1q23.1; chr1:156728471-156736960 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9332
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;2 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RRNAD1
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Rrnad1
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 229503 NCBI Gene Model | MGI Sequence Detail 7982 C57BL/6J ±  kb
transcript NM_153562 RefSeq | MGI Sequence Detail 2847 C57BL/6  
polypeptide Q8BZG5 UniProt | EBI | MGI Sequence Detail 475 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR025714 Methyltransferase domain
    IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Diseases 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory