About   Help   FAQ
Rin3 Gene Detail
Summary
  • Symbol
    Rin3
  • Name
    Ras and Rab interactor 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385708
    NCBI Gene: 217835
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:102283048-102390855 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 51.45 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    816 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385708
 protein coding gene Chr12:102282840-102390855 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020030
 protein coding gene Chr12:103908644-104019277 (+)
A/J MGP_AJ_G0019986
 protein coding gene Chr12:99916394-100034550 (+)
AKR/J MGP_AKRJ_G0019962
 protein coding gene Chr12:102759371-102874124 (+)
BALB/cJ MGP_BALBcJ_G0019972
 protein coding gene Chr12:100256307-100364086 (+)
C3H/HeJ MGP_C3HHeJ_G0019774
 protein coding gene Chr12:103215668-103333309 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020421
 protein coding gene Chr12:107160937-107272285 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018034
 protein coding gene Chr12:96943049-97056617 (+)
CAST/EiJ MGP_CASTEiJ_G0019320
 protein coding gene Chr12:98047215-98164366 (+)
CBA/J MGP_CBAJ_G0019746
 protein coding gene Chr12:111122595-111240246 (+)
DBA/2J MGP_DBA2J_G0019857
 protein coding gene Chr12:99439899-99551981 (+)
FVB/NJ MGP_FVBNJ_G0019846
 protein coding gene Chr12:98163532-98280116 (+)
LP/J MGP_LPJ_G0019933
 protein coding gene Chr12:103762269-103876316 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019886
 protein coding gene Chr12:114598691-114715804 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020450
 protein coding gene Chr12:102267219-102375595 (+)
PWK/PhJ MGP_PWKPhJ_G0019083
 protein coding gene Chr12:93994156-94104212 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018879
 protein coding gene Chr12:96440274-96551241 (+)
WSB/EiJ MGP_WSBEiJ_G0019374
 protein coding gene Chr12:103152416-103266942 (+)



Homology
more
  • Human Ortholog
    RIN3, Ras and Rab interactor 3
  • Vertebrate Orthologs
    6
  • Human Ortholog
    RIN3, Ras and Rab interactor 3
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 79890
    neXtProt AC: NX_Q8TB24
    UniProt: Q8TB24

  • Chr Location
    14q32.12; chr14:92513773-92688994 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
    4
  • Tissues
    1
  • cDNA Data
    16
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000044456 Ensembl Gene Model | MGI Sequence Detail 107808 C57BL/6J ±  kb
    transcript ENSMUST00000056950 Ensembl | MGI Sequence Detail 3892 Not Applicable  
    polypeptide ENSMUSP00000060771 Ensembl | MGI Sequence Detail 980 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 16
      cDNA 16

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:2145127
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 1
      Gene Ontology 3
      Phenotypes 8
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer & Copyright Notice
    Send questions and comments to User Support.     		last database update
    12/03/2019
    MGI 6.14     		The Jackson Laboratory