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Cyp4f13 Gene Detail
Summary
  • Symbol
    Cyp4f13
  • Name
    cytochrome P450, family 4, subfamily f, polypeptide 13
  • Synonyms
    0610030I10Rik, leukotriene B4 omega hydroxylase, P450 CYP4F13
  • Feature Type
    protein coding gene
  • IDs
    MGI:2158641
    NCBI Gene: 170716
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:33143662-33166376 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    287 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2158641
protein coding gene Chr17:33143662-33166389 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023516
protein coding gene Chr17:32816499-32839875 (-)
A/J MGP_AJ_G0023474
protein coding gene Chr17:31723763-31748436 (-)
AKR/J MGP_AKRJ_G0023440
protein coding gene Chr17:32037027-32059385 (-)
BALB/cJ MGP_BALBcJ_G0023479
protein coding gene Chr17:31821691-31844353 (-)
C3H/HeJ MGP_C3HHeJ_G0023241
protein coding gene Chr17:32432566-32454995 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023922
protein coding gene Chr17:33938858-33961336 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021396
protein coding gene Chr17:28990108-29012535 (-)
CAST/EiJ MGP_CASTEiJ_G0022742
protein coding gene Chr17:32539457-32563810 (-)
CBA/J MGP_CBAJ_G0023215
protein coding gene Chr17:35443138-35467596 (-)
DBA/2J MGP_DBA2J_G0023345
protein coding gene Chr17:31108715-31131646 (-)
FVB/NJ MGP_FVBNJ_G0023315
protein coding gene Chr17:30921743-30944502 (-)
LP/J MGP_LPJ_G0023424
protein coding gene Chr17:33036249-33059935 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023334
protein coding gene Chr17:34433468-34457396 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023964
protein coding gene Chr17:32402070-32425685 (-)
PWK/PhJ MGP_PWKPhJ_G0022489
protein coding gene Chr17:30031653-30055162 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022309
protein coding gene Chr17:30378522-30404375 (-)
WSB/EiJ MGP_WSBEiJ_G0022803
protein coding gene Chr17:32415887-32440274 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotypes from multigenic genotypes
    5 phenotype references
Mice homozygous for a null allele exhibit susceptibility to atherosclerosis.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024055 Ensembl Gene Model | MGI Sequence Detail 22715 C57BL/6J ±  kb
transcript ENSMUST00000075253 Ensembl | MGI Sequence Detail 1752 Not Applicable  
polypeptide ENSMUSP00000074733 Ensembl | MGI Sequence Detail 523 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    9 Sequences
  • InterPro Domains
    IPR001128 Cytochrome P450
    IPR017972 Cytochrome P450, conserved site
    IPR002401 Cytochrome P450, E-class, group I
    IPR002402 Cytochrome P450, E-class, group II
    IPR036396 Cytochrome P450 superfamily
Molecular
Reagents
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  • All nucleic 56
    cDNA 55
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1915640
References
more
  • Summaries
    All 28
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:289999 Han J, et al., Confirmation of Ath26 locus on chromosome 17 and identification of Cyp4f13 as an atherosclerosis modifying gene. Atherosclerosis. 2019 Jul;286:71-78

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/05/2021
MGI 6.17
The Jackson Laboratory