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Pecr
Gene Detail
Symbol

Name
ID
Pecr
peroxisomal trans-2-enoyl-CoA reductase
MGI:2148199
Synonyms
2400003B18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
36.46 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr1:72259167-72284314 bp, - strand
From VEGA annotation of GRCm38

  25148 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:69255  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PECR
Gene Tree: Pecr

Human
homologs
PECR, peroxisomal trans-2-enoyl-CoA reductase
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 55825
neXtProt AC: NX_Q9BY49

Human Synonyms: DCRRP, HPDHASE, HSA250303, PVIARL, SDR29C1, TERP

Human Chr (Location): 2q35; chr2:216038388-216081816 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(16) : Gene trapped(14) Targeted(2)
Interactions
Pecr interacts with 108 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (23 annotations)
Process fatty acid biosynthetic process, fatty acid elongation, ...
Component intracellular membrane-bounded organelle, mitochondrion, ...
Function oxidoreductase activity, receptor binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (94)    Tissues (94)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase pecr ; ZFIN pecr    NEW 
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000026657 (Evidence)
Ensembl Gene Model ENSMUSG00000026189 (Evidence)
Entrez Gene 111175 (Evidence)
NIA Mouse Gene Index U021460
EC 1.3.1.38
Consensus CDS Project CCDS35607.1
International Mouse Phenotyping Consortium Status Pecr
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026657 VEGA Gene Model | MGI Sequence Detail 25148 C57BL/6J ±  kb
transcript OTTMUST00000065967 VEGA | MGI Sequence Detail 1186 Not Applicable 
polypeptide OTTMUSP00000032952 VEGA | MGI Sequence Detail 303 Not Applicable 

For the selected sequences
All sequences(41) RefSeq(4) UniProt(4)
Polymorphisms
SNPs within 2kb(273 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002347 Glucose/ribitol dehydrogenase
InterPro IPR016040 NAD(P)-binding domain
InterPro IPR002198 Short-chain dehydrogenase/reductase SDR
Protein Ontology PR:000012535 peroxisomal trans-2-enoyl-CoA reductase
References
(Earliest) J:63915 Das AK, et al., Molecular cloning and expression of mammalian peroxisomal trans-2-enoyl-coenzyme A reductase cDNAs. J Biol Chem. 2000 Aug 11;275(32):24333-40
(Latest) J:218247 Cossette SM, et al., Sucrose non-fermenting related kinase enzyme is essential for cardiac metabolism. Biol Open. 2014;4(1):48-61
All references(33)
Other
accession IDs
MGI:1916961

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory