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Cyp2c50 Gene Detail
Summary
  • Symbol
    Cyp2c50
  • Name
    cytochrome P450, family 2, subfamily c, polypeptide 50
  • Feature Type
    protein coding gene
  • IDs
    MGI:2147497
    NCBI Gene: 107141
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:40089688-40113950 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 34.24 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    169 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2147497
protein coding gene Chr19:40089679-40113955 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025108
protein coding gene Chr19:39278446-39302726 (+)
A/J MGP_AJ_G0025085
protein coding gene Chr19:37360306-37381901 (+)
AKR/J MGP_AKRJ_G0025053
protein coding gene Chr19:38627417-38651849 (+)
BALB/cJ MGP_BALBcJ_G0025079
protein coding gene Chr19:37444617-37468263 (+)
C3H/HeJ MGP_C3HHeJ_G0024839
protein coding gene Chr19:38740864-38777501 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0022936
protein coding gene Chr19:36808615-36833885 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0024819
protein coding gene Chr19:42311991-42337976 (+)
DBA/2J MGP_DBA2J_G0024951
protein coding gene Chr19:37250717-37276581 (+)
FVB/NJ MGP_FVBNJ_G0024912
protein coding gene Chr19:37019196-37039116 (+)
LP/J MGP_LPJ_G0025037
protein coding gene Chr19:39302777-39327063 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024943
protein coding gene Chr19:42014632-42053631 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025580
protein coding gene Chr19:38664982-38698303 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0023857
protein coding gene Chr19:37412967-37451554 (+)
WSB/EiJ MGP_WSBEiJ_G0024374
protein coding gene Chr19:38806894-38828071 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054827 Ensembl Gene Model | MGI Sequence Detail 24263 C57BL/6J ±  kb
transcript ENSMUST00000080171 Ensembl | MGI Sequence Detail 1812 Not Applicable  
polypeptide ENSMUSP00000079065 Ensembl | MGI Sequence Detail 490 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 49
    cDNA 49

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Gene Ontology 5
  • Earliest
    J:113341 Wang H, et al., Cloning, expression, and characterization of three new mouse cytochrome p450 enzymes and partial characterization of their fatty acid oxidation activities. Mol Pharmacol. 2004 May;65(5):1148-58
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory