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Cyp2c50
Gene Detail
Symbol

Name
ID
Cyp2c50
cytochrome P450, family 2, subfamily c, polypeptide 50
MGI:2147497
Feature Type
protein coding gene
Genetic Map
Chromosome 19
34.24 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:40089688-40113950 bp, + strand
From VEGA annotation of GRCm38

  24263 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:137231  Vertebrate Homology Class
3 mouse

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2c50

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp2c50 interacts with 115 markers (Mir10a, Mir10b, Mir15b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(48)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(48) cDNA(48)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000028293 (Evidence)
Ensembl Gene ModelENSMUSG00000054827 (Evidence)
Entrez Gene107141 (Evidence)
UniGene474575
EC1.14.14.1
Consensus CDS ProjectCCDS29801.1, CCDS50433.1
International Mouse Knockout Project StatusCyp2c50
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028293 VEGA Gene Model | MGI Sequence Detail 24263 C57BL/6J ±  kb
transcript OTTMUST00000070105 VEGA | MGI Sequence Detail 1812 Not Applicable 
polypeptide OTTMUSP00000035690 VEGA | MGI Sequence Detail 490 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(6) UniProt(1)
Polymorphisms
SNPs within 2kb(175 from dbSNP Build 137)    SNPs within 2kb including multiple locations(179)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
Protein Ontology PR:000006230 cytochrome P450 2C50
References
(Earliest) J:113341 Wang H, et al., Cloning, expression, and characterization of three new mouse cytochrome p450 enzymes and partial characterization of their fatty acid oxidation activities. Mol Pharmacol. 2004 May;65(5):1148-58
(Latest) J:141632 Kasai F, et al., Emergence of complex rearrangements at translocation breakpoints in a transgenic mouse; implications for mechanisms involved in the formation of chromosome rearrangements. Cytogenet Genome Res. 2007;119(1-2):83-90
All references(23)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory