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N4bp2l1
Gene Detail
Symbol

Name
ID
N4bp2l1
NEDD4 binding protein 2-like 1
MGI:2140872
Synonyms
2410024N18Rik, B230342M21Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
89.55 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:150571643-150594525 bp, - strand
From NCBI annotation of GRCm38

  22883 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:14151  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog

HCOP human homology predictions: N4BP2L1
Gene Tree: N4bp2l1

Human
homologs
N4BP2L1, NEDD4 binding protein 2-like 1
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 90634
neXtProt AC: NX_Q5TBK1

Human Synonyms: CG018

Human Chr (Location): 13q13.1; chr13:32400723-32429614 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
N4bp2l1 interacts with 188 markers (Mir7-1, Mir10a, Mir10b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(47)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase n4bp2l1    NEW 
Molecular
reagents
All nucleic(47) cDNA(47)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000041132 (Evidence)
Entrez Gene 100637 (Evidence)
UniGene 279932
DFCI TC1596081, TC1580413, TC1600147, TC1613602
DoTS DT.491278, DT.101719749, DT.97396502, DT.529816
NIA Mouse Gene Index U026989
Consensus CDS Project CCDS19887.1
International Mouse Phenotyping Consortium Status N4bp2l1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 100637 NCBI Gene Model | MGI Sequence Detail 22883 C57BL/6J ±  kb
transcript NM_133898 RefSeq | MGI Sequence Detail 1907 C57BL/6 
polypeptide Q3V2Q8 UniProt | EBI | MGI Sequence Detail 238 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(4) UniProt(1)
Polymorphisms
SNPs within 2kb(114 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
Protein Ontology PR:000010939 NEDD4-binding protein 2-like 1
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)
Other
accession IDs
MGI:1917479

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory