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Phf24
Gene Detail
Symbol

Name
ID
Phf24
PHD finger protein 24
MGI:2140712
Synonyms
mKIAA1045, N28178
Feature Type
protein coding gene
Genetic Map
Chromosome 4
22.91 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:42916660-42944752 bp, + strand
From VEGA annotation of GRCm38

  28093 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18208  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PHF24
Gene Tree: Phf24

Human
homologs
PHF24, PHD finger protein 24
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 23349
neXtProt AC: NX_Q9UPV7

Human Synonyms: KIAA1045

Human Chr (Location): 9p13.3; chr9:34810040-34982544 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Phf24 interacts with 431 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function metal ion binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (136)    Tissues (38)    Images (32)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 136
cDNA source data(39)
Other mouse links: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(39) cDNA(39)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000006615 (Evidence)
Ensembl Gene Model ENSMUSG00000036062 (Evidence)
Entrez Gene 230085 (Evidence)
UniGene 240965
DFCI TC1654142, TC1581330, TC1584270, TC1685519
DoTS DT.101388809, DT.101246079, DT.97355602
NIA Mouse Gene Index U004219
Consensus CDS Project CCDS18083.1
International Mouse Phenotyping Consortium Status Phf24
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006615 VEGA Gene Model | MGI Sequence Detail 28093 C57BL/6J ±  kb
transcript OTTMUST00000015083 VEGA | MGI Sequence Detail 6494 Not Applicable 
polypeptide OTTMUSP00000006974 VEGA | MGI Sequence Detail 400 Not Applicable 

For the selected sequences
All sequences(89) RefSeq(24) UniProt(7)
Polymorphisms
SNPs within 2kb(97 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011011 Zinc finger, FYVE/PHD-type
InterPro IPR019786 Zinc finger, PHD-type, conserved site
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
References
(Earliest) J:83413 Okazaki N, et al., Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. DNA Res. 2003 Feb 28;10(1):35-48
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory