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N28178
Gene Detail
Symbol

Name
ID
N28178
expressed sequence N28178
MGI:2140712
Synonyms
mKIAA1045
Feature Type
protein coding gene
Genetic Map
Chromosome 4
22.91 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:42916660-42944752 bp, + strand
From VEGA annotation of GRCm38

  28093 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18208  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: N28178

Human
homologs
Human Homolog KIAA1045, KIAA1045
NCBI Gene ID 23349
neXtProt AC  NX_Q9UPV7
Human Chr (Location)  9p13.3; chr9:34957487-34982544 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
N28178 interacts with 432 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function metal ion binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (136)    Tissues (38)    Images (32)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 136
cDNA source data(39)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(39) cDNA(39)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000006615 (Evidence)
Ensembl Gene ModelENSMUSG00000036062 (Evidence)
Entrez Gene230085 (Evidence)
UniGene240965
DFCITC1581330, TC1584270, TC1654142, TC1685519
DoTSDT.101246079, DT.101388809, DT.97355602
NIA Mouse Gene IndexU004219
Consensus CDS ProjectCCDS18083.1
International Mouse Knockout Project StatusN28178
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006615 VEGA Gene Model | MGI Sequence Detail 28093 C57BL/6J ±  kb
transcript OTTMUST00000015083 VEGA | MGI Sequence Detail 6494 Not Applicable 
polypeptide OTTMUSP00000006974 VEGA | MGI Sequence Detail 400 Not Applicable 

For the selected sequences
All sequences(93) RefSeq(28) UniProt(7)
Polymorphisms
SNPs within 2kb(97 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011011 Zinc finger, FYVE/PHD-type
InterPro IPR019786 Zinc finger, PHD-type, conserved site
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
References
(Earliest) J:83413 Okazaki N, et al., Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. DNA Res. 2003 Feb 28;10(1):35-48
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(26)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory