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Ankrd50 Gene Detail
Summary
  • Symbol
    Ankrd50
  • Name
    ankyrin repeat domain 50
  • Synonyms
    E430012K20Rik, mKIAA3019
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139777
    NCBI Gene: 99696
Location & Maps
more
  • Sequence Map
    Chr3:38449259-38484844 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      35586 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 18.49 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ANKRD50, ankyrin repeat domain 50
  • Vertebrate Orthologs
    2
  • Human Ortholog
    ANKRD50, ankyrin repeat domain 50
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 57182
    neXtProt AC: NX_Q9ULJ7

  • Chr Location
    4q28.1; chr4:124664048-124713220 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    5
  • Gene trapped
    3
  • Radiation induced
    2
  • Genomic Mutations
    2 involving Ankrd50
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026512 VEGA Gene Model | MGI Sequence Detail 35586 C57BL/6J ±  kb
transcript OTTMUST00000065579 VEGA | MGI Sequence Detail 7031 Not Applicable  
polypeptide OTTMUSP00000032698 VEGA | MGI Sequence Detail 1390 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    415 from dbSNP Build 142
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR002110 Ankyrin repeat
    IPR020683 Ankyrin repeat-containing domain
Molecular
Reagents
less
  • All nucleic 48
    cDNA 48

    Microarray probesets 4
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory