About   Help   FAQ
Due to maintenance, access to MGI may be intermittent starting at 7:30 AM ET Thursday, March 11.
Ankrd50 Gene Detail
Summary
  • Symbol
    Ankrd50
  • Name
    ankyrin repeat domain 50
  • Synonyms
    E430012K20Rik, mKIAA3019
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139777
    NCBI Gene: 99696
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:38449259-38484844 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 18.49 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    415 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139777
protein coding gene Chr3:38449259-38484862 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027175
protein coding gene Chr3:36332702-36370054 (-)
A/J MGP_AJ_G0027135
protein coding gene Chr3:35595096-35630733 (-)
AKR/J MGP_AKRJ_G0027104
protein coding gene Chr3:36263340-36298946 (-)
BALB/cJ MGP_BALBcJ_G0027147
protein coding gene Chr3:35344536-35380819 (-)
C3H/HeJ MGP_C3HHeJ_G0026890
protein coding gene Chr3:36337285-36373512 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027593
protein coding gene Chr3:37986636-38023551 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024954
protein coding gene Chr3:33260339-33296431 (-)
CAST/EiJ MGP_CASTEiJ_G0026343
protein coding gene Chr3:36220262-36256067 (-)
CBA/J MGP_CBAJ_G0026867
protein coding gene Chr3:39039957-39077228 (-)
DBA/2J MGP_DBA2J_G0027001
protein coding gene Chr3:35054966-35091418 (-)
FVB/NJ MGP_FVBNJ_G0026969
protein coding gene Chr3:34467741-34503673 (-)
LP/J MGP_LPJ_G0027113
protein coding gene Chr3:37152844-37189435 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026988
protein coding gene Chr3:41510814-41547242 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027652
protein coding gene Chr3:36127105-36164115 (-)
PWK/PhJ MGP_PWKPhJ_G0026076
protein coding gene Chr3:34738622-34774862 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025888
protein coding gene Chr3:35473062-35510524 (-)
WSB/EiJ MGP_WSBEiJ_G0026417
protein coding gene Chr3:36139005-36175493 (-)



Homology
more
  • Human Ortholog
    ANKRD50, ankyrin repeat domain 50
  • Vertebrate Orthologs
    2
  • Human Ortholog
    ANKRD50, ankyrin repeat domain 50
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 57182
    neXtProt AC: NX_Q9ULJ7
    UniProt: Q9ULJ7

  • Chr Location
    4q28.1; chr4:124664048-124712732 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044864 Ensembl Gene Model | MGI Sequence Detail 35586 C57BL/6J ±  kb
transcript ENSMUST00000156038 Ensembl | MGI Sequence Detail 7031 Not Applicable  
polypeptide ENSMUSP00000122842 Ensembl | MGI Sequence Detail 1390 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR002110 Ankyrin repeat
    IPR020683 Ankyrin repeat-containing domain
    IPR036770 Ankyrin repeat-containing domain superfamily
Molecular
Reagents
less
  • All nucleic 50
    cDNA 50

    Microarray probesets 4
References
more
  • Summaries
    All 29
    Diseases 1
    Phenotypes 9
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
03/02/2021
MGI 6.16
The Jackson Laboratory