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Lpcat4 Gene Detail
Summary
  • Symbol
    Lpcat4
  • Name
    lysophosphatidylcholine acyltransferase 4
  • Synonyms
    Agpat7, Aytl3, LPEAT2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138993
    NCBI Gene: 99010
  • Gene Overview
    MyGene.info: LPCAT4
Location & Maps
more
  • Sequence Map
    Chr2:112239468-112247111 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7644 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 56.96 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    LPCAT4, lysophosphatidylcholine acyltransferase 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    LPCAT4, lysophosphatidylcholine acyltransferase 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    AGPAT7, AYTL3, LPAAT-eta, LPEAT2
  • Links
    NCBI Gene ID: 254531
    neXtProt AC: NX_Q643R3

  • Chr Location
    15q14; chr15:34358888-34367196 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Lpcat4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015146 VEGA Gene Model | MGI Sequence Detail 7644 C57BL/6J ±  kb
transcript OTTMUST00000035928 VEGA | MGI Sequence Detail 2275 Not Applicable  
polypeptide OTTMUSP00000016128 VEGA | MGI Sequence Detail 524 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    49 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory