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Gata3un Gene Detail
Summary
  • Symbol
    Gata3un
  • Name
    Gata3 upstream neighbor
  • Synonyms
    9230102O04Rik, linc_Gata3
Location &
Maps
more
  • Sequence Map
    Chr2:9887852-9894351 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 6.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924932
 protein coding gene Chr2:9887852-9894351 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025335
 protein coding gene Chr2:7219847-7226346 (-)
A/J MGP_AJ_G0025312
 protein coding gene Chr2:6896022-6902521 (-)
AKR/J MGP_AKRJ_G0025281
 protein coding gene Chr2:7111829-7118326 (-)
BALB/cJ MGP_BALBcJ_G0025308
 protein coding gene Chr2:6898466-6904961 (-)
C3H/HeJ MGP_C3HHeJ_G0025068
 protein coding gene Chr2:7068264-7074763 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025750
 protein coding gene Chr2:7414954-7421451 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023164
 protein coding gene Chr2:6407374-6413819 (-)
CAST/EiJ MGP_CASTEiJ_G0024531
 protein coding gene Chr2:7089805-7096310 (-)
CBA/J MGP_CBAJ_G0025047
 protein coding gene Chr2:7703046-7709623 (-)
DBA/2J MGP_DBA2J_G0025179
 protein coding gene Chr2:6828458-6834957 (-)
FVB/NJ MGP_FVBNJ_G0025141
 protein coding gene Chr2:6770222-6776706 (-)
LP/J MGP_LPJ_G0025265
 protein coding gene Chr2:7093472-7099955 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025173
 protein coding gene Chr2:7703161-7709660 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025808
 protein coding gene Chr2:7066272-7072761 (-)
PWK/PhJ MGP_PWKPhJ_G0024282
 protein coding gene Chr2:6810752-6817482 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024082
 protein coding gene Chr2:7053205-7059723 (-)
WSB/EiJ MGP_WSBEiJ_G0024601
 protein coding gene Chr2:7163195-7169715 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 phenotype reference
Mice homozygous for a null allele are viable with no obvious defects.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    742
  • Tissues
    30
  • cDNA Data
    1
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 77682 NCBI Gene Model | MGI Sequence Detail 6500 C57BL/6J ±  kb
transcript NR_040511 RefSeq | MGI Sequence Detail 737 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 1
    Primer pair 1
    Other 1

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:330639 Han X, et al., Mouse knockout models reveal largely dispensable but context-dependent functions of lncRNAs during development. J Mol Cell Biol. 2018 Apr 1;10(2):175-178
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory