About   Help   FAQ
9530003J23Rik Gene Detail
Summary
  • Symbol
    9530003J23Rik
  • Name
    RIKEN cDNA 9530003J23 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924647
    NCBI Gene: 77397
  • Gene Overview
    MyGene.info: LYZ
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr10:117232237-117238703 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      6467 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 65.28 cM, cytoband D2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    LYZ, lysozyme
  • Vertebrate Orthologs
    2
  • Human Ortholog
    LYZ, lysozyme
    Orthology source: HGNC
  • Synonyms
    LYZF1, LZM
  • Links
    NCBI Gene ID: 4069
    neXtProt AC: NX_P61626
    UniProt: P61626

  • Chr Location
    12q15; chr12:69348354-69354233 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human LYZ associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027778 VEGA Gene Model | MGI Sequence Detail 6467 C57BL/6J ±  kb
transcript OTTMUST00000068749 VEGA | MGI Sequence Detail 1233 Not Applicable  
polypeptide OTTMUSP00000034821 VEGA | MGI Sequence Detail 151 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    59 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • EC
  • InterPro Domains
    IPR001916 Glycoside hydrolase, family 22
    IPR019799 Glycoside hydrolase, family 22, conserved site
    IPR000974 Glycoside hydrolase, family 22, lysozyme
    IPR023346 Lysozyme-like domain superfamily
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/05/2017
MGI 6.11
The Jackson Laboratory