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Clasp1 Gene Detail
Summary
  • Symbol
    Clasp1
  • Name
    CLIP associating protein 1
  • Synonyms
    1700030C23Rik, 5730583A19Rik, B130045P17Rik, CLASP1, CLASP1alpha, mCLASP1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923957
    NCBI Gene: 76707
  • Gene Overview
    MyGene.info: CLASP1
  • Alliance
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:118389058-118609462 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 52.14 cM, cytoband E2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    943 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923957
protein coding gene Chr1:118389058-118612678 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016391
protein coding gene Chr1:121080834-121307024 (+)
A/J MGP_AJ_G0016374
protein coding gene Chr1:116757276-116978442 (+)
AKR/J MGP_AKRJ_G0016339
protein coding gene Chr1:120208775-120434408 (+)
BALB/cJ MGP_BALBcJ_G0016334
protein coding gene Chr1:117017199-117237129 (+)
C3H/HeJ MGP_C3HHeJ_G0016160
protein coding gene Chr1:120379840-120605351 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016795
protein coding gene Chr1:125700962-125959988 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014508
protein coding gene Chr1:110439186-110652424 (+)
CAST/EiJ MGP_CASTEiJ_G0015741
protein coding gene Chr1:119101638-119327784 (+)
CBA/J MGP_CBAJ_G0016133
protein coding gene Chr1:130072610-130313771 (+)
DBA/2J MGP_DBA2J_G0016239
protein coding gene Chr1:115770953-115992421 (+)
FVB/NJ MGP_FVBNJ_G0016238
protein coding gene Chr1:114499989-114719974 (+)
LP/J MGP_LPJ_G0016310
protein coding gene Chr1:122427600-122653234 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016263
protein coding gene Chr1:135860266-136087618 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016831
protein coding gene Chr1:119893526-120128025 (+)
PWK/PhJ MGP_PWKPhJ_G0015527
protein coding gene Chr1:114742505-114963879 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015315
protein coding gene Chr1:118776675-119004904 (+)
WSB/EiJ MGP_WSBEiJ_G0015803
protein coding gene Chr1:119788355-120014882 (+)



Homology
more
  • Human Ortholog
    CLASP1, cytoplasmic linker associated protein 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CLASP1, cytoplasmic linker associated protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MAST1
  • Links
    NCBI Gene ID: 23332
    neXtProt AC: NX_Q7Z460
    UniProt: Q7Z460

  • Chr Location
    2q14.2-q14.3; chr2:121337776-121649476 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41024
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CLASP1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 76707 NCBI Gene Model | MGI Sequence Detail 220405 C57BL/6J ±  kb
transcript NM_001293300 RefSeq | MGI Sequence Detail 7951 C57BL/6  
polypeptide Q80TV8 UniProt | EBI | MGI Sequence Detail 1535 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 214
    cDNA 213
    Primer pair 1

    Microarray probesets 7
Other
Accession IDs
less
MGI:1917924, MGI:2443918
References
more
  • Summaries
    All 41
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:256956 Brinegar AE, et al., Extensive alternative splicing transitions during postnatal skeletal muscle development are required for calcium handling functions. Elife. 2017 Aug 11;6

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory