1600029D21Rik
Gene Detail

Symbol Name ID

1600029D21Rik RIKEN cDNA 1600029D21 gene MGI:1923759

Synonyms

0610037B23Rik, PLET1

Feature Type

protein coding gene

Genetic Map

Chromosome 9

27.71 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr9:50494525-50505639 bp, + strand From NCBI annotation of GRCm38   11115 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:49928  Vertebrate Homology Class
1 mouse; 1 rat; 1 cattle

Gene Tree: 1600029D21Rik

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Component

external side of plasma membrane, integral to membrane, ...

External Resources: FuncBase

Expression

Literature Summary: (8 records)
Data Summary: Results (81)    Tissues (55)    Images (31)
Theiler Stages: 7, 9, 10, 11, 12, 13, 14, 15, 17, 18, 20, 22, 28

Assay Type	Results
RNA in situ	64
Northern blot	10
RT-PCR	7

cDNA source data(13)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(16) cDNA(13) Primer pair(2) Other(1)
Microarray probesets(5)

Other database links

Ensembl Gene Model	ENSMUSG00000032068 (Evidence)
Entrez Gene	76509 (Evidence)
DFCI	TC1574388, TC1604021, TC1698741
DoTS	DT.102552999, DT.60118705, DT.94196335
NIA Mouse Gene Index	U010457
Consensus CDS Project	CCDS40619.1
International Mouse Knockout Project Status	1600029D21Rik

Sequences

Length	Strain/Species
genomic	76509	NCBI Gene Model | MGI Sequence Detail	11115	C57BL/6J
transcript	NM_029639	RefSeq | MGI Sequence Detail	1846	C57BL/6
polypeptide	Q8VEN2	UniProt | EBI | MGI Sequence Detail	237	Not Applicable

All sequences(26) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(77 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR026184	Placenta-expressed transcript 1
Protein Ontology	PR:000012866	placenta-expressed transcript 1 protein

Graphical View of Protein Domain Structure

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:177992 Nowell CS, et al., Foxn1 regulates lineage progression in cortical and medullary thymic epithelial cells but is dispensable for medullary sublineage divergence. PLoS Genet. 2011 Nov;7(11):e1002348
All references(33)

Other accession IDs

MGI:1915617, MGI:2142914, MGI:2143236