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Plet1
Gene Detail
 Symbol
Name
ID
Plet1
placenta expressed transcript 1
MGI:1923759
Synonyms 0610037B23Rik, 1600029D21Rik, PLET1
Feature Type protein coding gene
Genetic Map
Chromosome 9
27.71 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:50494525-50505639 bp, + strand
From NCBI annotation of GRCm38

  11115 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49928  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Plet1

Human
homologs
Human Homolog PLET1, placenta expressed transcript 1
NCBI Gene ID 349633
neXtProt AC  NX_Q6UQ28
Human Synonyms  C11orf34
Human Chr (Location)  11q23.1; chr11:112248153-112260860 (-)  GRCh38
Alleles
and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cell differentiation, negative regulation of cell-matrix adhesion, ...
Component anchored component of membrane, apical plasma membrane, ...
External Resources: FuncBase
Expression
Literature Summary: (9 records)
Data Summary: Results (81)    Tissues (55)    Images (31)
Theiler Stages: 7, 9, 10, 11, 12, 13, 14, 15, 17, 18, 20, 22, 28
Assay TypeResults
RNA in situ 64
Northern blot 10
RT-PCR 7
cDNA source data(251)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(254) cDNA(251) Primer pair(2) Other(1)
Microarray probesets(5)
Other database
links
Ensembl Gene ModelENSMUSG00000032068 (Evidence)
Entrez Gene76509 (Evidence)
UniGene29959
DFCITC1574388, TC1604021, TC1698741
DoTSDT.102552999, DT.60118705, DT.94196335
NIA Mouse Gene IndexU010457
Consensus CDS ProjectCCDS40619.1
International Mouse Knockout Project StatusPlet1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 76509 NCBI Gene Model | MGI Sequence Detail 11115 C57BL/6J ±  kb
transcript NM_029639 RefSeq | MGI Sequence Detail 1846 C57BL/6 
polypeptide Q8VEN2 UniProt | EBI | MGI Sequence Detail 237 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(116 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026184 Placenta-expressed transcript 1
Protein Ontology PR:000012866 placenta-expressed transcript 1 protein
Graphical View of Protein Domain Structure
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:206321 Veniaminova NA, et al., Keratin 79 identifies a novel population of migratory epithelial cells that initiates hair canal morphogenesis and regeneration. Development. 2013 Dec;140(24):4870-80
All references(36)
Other
accession IDs
MGI:1915617, MGI:2142914, MGI:2143236

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory