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Plet1
Gene Detail
Symbol

Name
ID
Plet1
placenta expressed transcript 1
MGI:1923759
Synonyms
0610037B23Rik, 1600029D21Rik, PLET1
Feature Type
protein coding gene
Genetic Map
Chromosome 9
27.71 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:50494525-50505482 bp, + strand
From VEGA annotation of GRCm38

  10958 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49928  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: PLET1
Gene Tree: Plet1

Human
homologs
PLET1, placenta expressed transcript 1
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 349633
neXtProt AC: NX_Q6UQ28

Human Synonyms: C11orf34

Human Chr (Location): 11q23.1; chr11:112248153-112260860 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Plet1 interacts with 154 markers (Mir29b-2, Mir30b, Mir30c-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cell differentiation, negative regulation of cell-matrix adhesion, ...
Component anchored component of membrane, apical plasma membrane, ...
External Resources: FuncBase
Expression
Literature Summary: (10 records)
Data Summary: Results (81)    Tissues (55)    Images (31)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 64
Northern blot 10
RT-PCR 7
cDNA source data(251)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(254) cDNA(251) Primer pair(2) Other(1)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000048527 (Evidence)
Ensembl Gene Model ENSMUSG00000032068 (Evidence)
Entrez Gene 76509 (Evidence)
UniGene 29959
DFCI TC1698741, TC1604021, TC1574388
DoTS DT.60118705, DT.102552999, DT.94196335
NIA Mouse Gene Index U010457
Consensus CDS Project CCDS40619.1
International Mouse Phenotyping Consortium Status Plet1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000048527 VEGA Gene Model | MGI Sequence Detail 10958 C57BL/6J ±  kb
transcript OTTMUST00000124350 VEGA | MGI Sequence Detail 1689 Not Applicable 
polypeptide OTTMUSP00000067677 VEGA | MGI Sequence Detail 237 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(116 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026184 Placenta-expressed transcript 1
Protein Ontology PR:000012866 placenta-expressed transcript 1 protein
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:214094 Reeh KA, et al., Ectopic TBX1 suppresses thymic epithelial cell differentiation and proliferation during thymus organogenesis. Development. 2014 Aug;141(15):2950-8
All references(36)
Other
accession IDs
MGI:1915617, MGI:2142914, MGI:2143236

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory