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Plet1
Gene Detail
Symbol

Name
ID
Plet1
placenta expressed transcript 1
MGI:1923759
Synonyms
0610037B23Rik, 1600029D21Rik, PLET1
Feature Type
protein coding gene
Genetic Map
Chromosome 9
27.71 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:50494525-50505482 bp, + strand
From VEGA annotation of GRCm38

  10958 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49928  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Plet1

Human
homologs
Human Homolog PLET1, placenta expressed transcript 1
NCBI Gene ID 349633
neXtProt AC  NX_Q6UQ28
Human Synonyms  C11orf34
Human Chr (Location)  11q23.1; chr11:112248153-112260860 (-)  GRCh38
Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Plet1 interacts with 154 markers (Mir29b-2, Mir30b, Mir30c-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cell differentiation, negative regulation of cell-matrix adhesion, ...
Component anchored component of membrane, apical plasma membrane, ...
External Resources: FuncBase
Expression
Literature Summary: (9 records)
Data Summary: Results (81)    Tissues (55)    Images (31)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 64
Northern blot 10
RT-PCR 7
cDNA source data(251)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(254) cDNA(251) Primer pair(2) Other(1)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000048527 (Evidence)
Ensembl Gene ModelENSMUSG00000032068 (Evidence)
Entrez Gene76509 (Evidence)
UniGene29959
DFCITC1574388, TC1604021, TC1698741
DoTSDT.94196335, DT.60118705, DT.102552999
NIA Mouse Gene IndexU010457
Consensus CDS ProjectCCDS40619.1
International Mouse Knockout Project StatusPlet1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000048527 VEGA Gene Model | MGI Sequence Detail 10958 C57BL/6J ±  kb
transcript OTTMUST00000124350 VEGA | MGI Sequence Detail 1689 Not Applicable 
polypeptide OTTMUSP00000067677 VEGA | MGI Sequence Detail 237 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(116 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026184 Placenta-expressed transcript 1
Protein Ontology PR:000012866 placenta-expressed transcript 1 protein
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:206321 Veniaminova NA, et al., Keratin 79 identifies a novel population of migratory epithelial cells that initiates hair canal morphogenesis and regeneration. Development. 2013 Dec;140(24):4870-80
All references(37)
Other
accession IDs
MGI:1915617, MGI:2142914, MGI:2143236

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory