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1500009C09Rik
Gene Detail
Symbol

Name
ID
1500009C09Rik
RIKEN cDNA 1500009C09 gene
MGI:1923755
Feature Type
protein coding gene
Genetic Map
Chromosome 15
38.56 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr15:82252397-82260753 bp, + strand
From VEGA annotation of GRCm38

  8357 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HCOP human homology predictions: LINC00634
Gene Tree: 1500009C09Rik
Human
homologs
LINC00634, long intergenic non-protein coding RNA 634
Orthology source: HGNC

IDs:
NCBI Gene ID: 339674

Human Synonyms: BK250D10.8

Human Chr (Location): 22q13.2; chr22:41952187-41958942 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Gene trapped(9) Radiation induced(1)
Genomic Mutations involving 1500009C09Rik (1)
Phenotype Images(2)
Interactions
1500009C09Rik interacts with 118 markers (Mir10a, Mir10b, Mir15a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(13)
Other mouse links: GEO   Expression Atlas
Molecular
reagents
All nucleic(13) cDNA(13)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000033544 (Evidence)
Ensembl Gene Model ENSMUSG00000068099 (Evidence)
Entrez Gene 76505 (Evidence)
UniGene 23023
DFCI TC1598764
DoTS DT.60103543
NIA Mouse Gene Index U040802
International Mouse Phenotyping Consortium Status 1500009C09Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033544 VEGA Gene Model | MGI Sequence Detail 8357 C57BL/6J ±  kb
transcript OTTMUST00000084450 VEGA | MGI Sequence Detail 1526 Not Applicable 
polypeptide OTTMUSP00000045521 VEGA | MGI Sequence Detail 81 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(2) UniProt(3)
Polymorphisms
SNPs within 2kb(119 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(23)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory