Ercc6l2
Gene Detail

Symbol Name ID

Ercc6l2 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 MGI:1923501

Synonyms

0610007P08Rik, 1700019D06Rik, 9330134C04Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 13

33.10 cM, cytoband B3
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr13:63815240-63900302 bp, + strand From VEGA annotation of GRCm38   85063 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:32564  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Ercc6l2

Human homologs

Human Homolog		ERCC6L2, excision repair cross-complementing rodent repair deficiency, complementation group 6-like 2
NCBI Gene ID		375748
neXtProt AC		NX_Q5T890
Human Synonyms		C9orf102, RAD26L, SR278
Human Chr (Location)		9q22.32; chr9:98637900-98731122 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(3) : Targeted(2) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (15 annotations)

Process	DNA repair, response to DNA damage stimulus
Component	cytoplasm, cytoskeleton, ...
Function	ATP binding, ATP-dependent helicase activity, ...

External Resources: FuncBase

Expression

cDNA source data(80)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(80) cDNA(80)
Microarray probesets(8)

Other database links

VEGA Gene Model	OTTMUSG00000026114 (Evidence)
Ensembl Gene Model	ENSMUSG00000021470 (Evidence)
Entrez Gene	76251 (Evidence)
UniGene	186610
DFCI	TC1582621, TC1584976, TC1588720, TC1591409, TC1598441, TC1603577, TC1606338, TC1610738, TC1617467
NIA Mouse Gene Index	U043344
EC	3.6.4.-
Consensus CDS Project	CCDS26593.1, CCDS36701.1
International Mouse Knockout Project Status	Ercc6l2

Sequences

Length	Strain/Species
genomic	OTTMUSG00000026114	VEGA Gene Model | MGI Sequence Detail	85063	C57BL/6J
transcript	OTTMUST00000087277	VEGA | MGI Sequence Detail	3436	Not Applicable
polypeptide	OTTMUSP00000047349	VEGA | MGI Sequence Detail	842	Not Applicable

All sequences(87) RefSeq(4) UniProt(12)

Polymorphisms

SNPs(294 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
InterPro	IPR001650	Helicase, C-terminal
InterPro	IPR014001	Helicase, superfamily 1/2, ATP-binding domain
InterPro	IPR027417	P-loop containing nucleoside triphosphate hydrolase
InterPro	IPR000330	SNF2-related

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Other accession IDs

MGI:1916653, MGI:3689365