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Jakmip1
Gene Detail
Symbol

Name
ID
Jakmip1
janus kinase and microtubule interacting protein 1
MGI:1923321
Synonyms
5830437M04Rik, C330021K24Rik, Gababrbp, Marlin-1
Feature Type
protein coding gene
Genetic Map
Chromosome 5
19.66 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr5:37028335-37148001 bp, + strand
From VEGA annotation of GRCm38

  119667 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:90789  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: JAKMIP1
Gene Tree: Jakmip1

Human
homologs
JAKMIP1, janus kinase and microtubule interacting protein 1
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 152789
neXtProt AC: NX_Q96N16

Human Synonyms: Gababrbp, JAMIP1, MARLIN1

Human Chr (Location): 4p16.1; chr4:6026199-6200591 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Chemically induced (ENU)(1) Radiation induced(2) Targeted(2)
Genomic Mutations involving Jakmip1 (3)
Incidental mutations (data from Mutagenetix , APF )
Mutations Annotated to Human Diseases (2)    Phenotype Images(4)
Interactions
Jakmip1 interacts with 99 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process cognition, protein transport, ...
Component cytoplasm, cytoskeleton, ...
Function GABA receptor binding, kinase binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(17)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase jakmip1    NEW 
Molecular
reagents
All nucleic(17) cDNA(17)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000026769 (Evidence)
Ensembl Gene Model ENSMUSG00000063646 (Evidence)
Entrez Gene 76071 (Evidence)
UniGene 85280
DFCI TC1580027, TC1594542, TC1630416
DoTS DT.55235050, DT.40182185, DT.97338864, DT.55254956, DT.94189836
NIA Mouse Gene Index U005518
Consensus CDS Project CCDS19246.1
International Mouse Phenotyping Consortium Status Jakmip1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026769 VEGA Gene Model | MGI Sequence Detail 119667 C57BL/6J ±  kb
transcript OTTMUST00000066203 VEGA | MGI Sequence Detail 2496 Not Applicable 
polypeptide OTTMUSP00000033138 VEGA | MGI Sequence Detail 831 Not Applicable 

For the selected sequences
All sequences(91) RefSeq(22) UniProt(7)
Polymorphisms
SNPs within 2kb(585 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR024836 Janus kinase and microtubule-interacting protein
Protein Ontology PR:000009199 janus kinase and microtubule-interacting protein 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:1925951

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory