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Ccdc162 Gene Detail
Summary
  • Symbol
    Ccdc162
  • Name
    coiled-coil domain containing 162
  • Synonyms
    5033413D22Rik, Gm29096, Gm6976
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923223
    NCBI Gene: 75973
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:41538844-41716537 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 22.48 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    762 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923223
protein coding gene Chr10:41538844-41716634 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017177
protein coding gene Chr10:40181693-40371850 (-)
A/J MGP_AJ_G0017154
protein coding gene Chr10:39064269-39242486 (-)
AKR/J MGP_AKRJ_G0017114
protein coding gene Chr10:39654062-39834944 (-)
BALB/cJ MGP_BALBcJ_G0017116
protein coding gene Chr10:39132295-39306286 (-)
C3H/HeJ MGP_C3HHeJ_G0016937
protein coding gene Chr10:39976294-40156857 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017575
protein coding gene Chr10:41408464-41602159 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015271
protein coding gene Chr10:37000737-37172092 (-)
CAST/EiJ MGP_CASTEiJ_G0016516
protein coding gene Chr10:40169204-40368819 (-)
CBA/J MGP_CBAJ_G0016911
protein coding gene Chr10:43305879-43497198 (-)
DBA/2J MGP_DBA2J_G0017016
protein coding gene Chr10:38568203-38742932 (-)
FVB/NJ MGP_FVBNJ_G0017011
protein coding gene Chr10:38067347-38240652 (-)
LP/J MGP_LPJ_G0017093
protein coding gene Chr10:40178075-40368509 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017041
protein coding gene Chr10:44113582-44301592 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017612
protein coding gene Chr10:39630310-39809253 (-)
PWK/PhJ MGP_PWKPhJ_G0016296
protein coding gene Chr10:38445470-38620442 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016080
protein coding gene Chr10:39447423-39624813 (-)
WSB/EiJ MGP_WSBEiJ_G0016579
protein coding gene Chr10:39957357-40140988 (-)



Homology
more
  • Human Ortholog
    CCDC162P, coiled-coil domain containing 162, pseudogene
  • Vertebrate Orthologs
    2
  • Human Ortholog
    CCDC162P, coiled-coil domain containing 162, pseudogene
    Orthology source: HGNC
  • Synonyms
    C6orf183, C6orf184, C6orf185, CCDC162
  • Links
    NCBI Gene ID: 221262

  • Chr Location
    6q21; chr6:109294303-109308220 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75973 NCBI Gene Model | MGI Sequence Detail 177694 C57BL/6J ±  kb
transcript NM_001358562 RefSeq | MGI Sequence Detail 7094 C57BL/6  
polypeptide Q0VG85 UniProt | EBI | MGI Sequence Detail 912 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR040401 Coiled-coil domain-containing protein 162
    IPR029376 Domain of unknown function DUF4549
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
Other
Accession IDs
less
MGI:3644617, MGI:5579802
References
more
  • Summaries
    All 29
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory