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1700003F12Rik
Gene Detail
Symbol

Name
ID
1700003F12Rik
RIKEN cDNA 1700003F12 gene
MGI:1922730
Feature Type
protein coding gene
Genetic Map
Chromosome 2
76.79 cM, cytoband H2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:154547085-154550003 bp, + strand
From VEGA annotation of GRCm38

  2919 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:136196  Vertebrate Homology Class
1 mouse; 1 rat; 1 cattle

HCOP human homology predictions: C20orf144
Gene Tree: 1700003F12Rik

Human
homologs
C20orf144, chromosome 20 open reading frame 144
Orthology source: HGNC

IDs:
NCBI Gene ID: 128864
neXtProt AC: NX_Q9BQM9

Human Synonyms: dJ63M2.6

Human Chr (Location): 20q11.22; chr20:33662286-33663915 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from CvDC )
Interactions
1700003F12Rik interacts with 13 markers (Mir15a, Mir16-1, Mir16-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(19)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(19) cDNA(19)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000015791 (Evidence)
Ensembl Gene Model ENSMUSG00000038523 (Evidence)
Entrez Gene 75480 (Evidence)
UniGene 440434
DFCI TC1584171
DoTS DT.530300
NIA Mouse Gene Index U002688
Consensus CDS Project CCDS16933.1
International Mouse Phenotyping Consortium Status 1700003F12Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015791 VEGA Gene Model | MGI Sequence Detail 2919 C57BL/6J ±  kb
transcript OTTMUST00000037550 VEGA | MGI Sequence Detail 704 Not Applicable 
polypeptide OTTMUSP00000016827 VEGA | MGI Sequence Detail 210 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(49 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory