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4930519F16Rik Pseudogene Detail
Summary
  • Symbol
    4930519F16Rik
  • Name
    RIKEN cDNA 4930519F16 gene
  • Synonyms
    Ppnx
Location &
Maps
more
  • Sequence Map
    ChrX:102273634-102300220 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 45.97 cM, cytoband C3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922356
 pseudogene ChrX:102226584-102300238 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039872
 pseudogene ChrX:99790197-99918639 (-)
A/J MGP_AJ_G0039878
 pseudogene ChrX:99735015-99878127 (-)
AKR/J MGP_AKRJ_G0039803
 pseudogene ChrX:102749834-102895108 (-)
BALB/cJ MGP_BALBcJ_G0039856
 pseudogene ChrX:98537444-98690665 (-)
C3H/HeJ MGP_C3HHeJ_G0039501
 pseudogene ChrX:100265481-100412434 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040422
 pseudogene ChrX:102739003-102915478 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037016
 pseudogene ChrX:97395578-97532960 (-)
CAST/EiJ MGP_CASTEiJ_G0038607
 pseudogene ChrX:84534579-84679576 (-)
CBA/J MGP_CBAJ_G0039469
 pseudogene ChrX:105938701-106086220 (-)
DBA/2J MGP_DBA2J_G0039674
 pseudogene ChrX:98984190-99134573 (-)
FVB/NJ MGP_FVBNJ_G0039632
 pseudogene ChrX:98307475-98436889 (-)
LP/J MGP_LPJ_G0039711
 pseudogene ChrX:100823241-100964442 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039628
 pseudogene ChrX:110563061-110748730 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040521
 pseudogene ChrX:99491279-99637846 (-)
PWK/PhJ MGP_PWKPhJ_G0038280
 pseudogene ChrX:82127714-82268407 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038024
 pseudogene ChrX:85225648-85382366 (-)
WSB/EiJ MGP_WSBEiJ_G0038838
 pseudogene ChrX:98227109-98365297 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    38
  • RefSeq
    6
  • UniProt
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031325 Ensembl Gene Model | MGI Sequence Detail 26587 C57BL/6J ±  kb
transcript ENSMUST00000183292 Ensembl | MGI Sequence Detail 800 Not Applicable  
polypeptide NP_001345199 RefSeq | MGI Sequence Detail 290 ZRU/MplStud  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR009003 Peptidase S1, PA clan
    IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold
    IPR001254 Serine proteases, trypsin domain
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 18
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory