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Rita1
Gene Detail
Symbol

Name
ID
Rita1
RBPJ interacting and tubulin associated 1
MGI:1922021
Synonyms
1110008J03Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
60.63 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:120594305-120612589 bp, - strand
From VEGA annotation of GRCm38

  18285 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12585  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog

HCOP human homology predictions: RITA1
Gene Tree: Rita1

Human
homologs
RITA1, RBPJ interacting and tubulin associated 1
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 84934
neXtProt AC: NX_Q96K30

Human Synonyms: C12orf52, RITA

Human Chr (Location): 12q24.13; chr12:113185526-113192368 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rita1 interacts with 76 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process negative regulation of Notch signaling pathway, nervous system development, ...
Component centrosome, cytoplasm, ...
Function tubulin binding
External Resources: FuncBase
Expression
cDNA source data(14)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rita1    NEW 
Molecular
reagents
All nucleic(14) cDNA(14)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000025342 (Evidence)
Ensembl Gene Model ENSMUSG00000029600 (Evidence)
Entrez Gene 100764 (Evidence)
UniGene 9654
NIA Mouse Gene Index U026670
Consensus CDS Project CCDS51635.1
International Mouse Phenotyping Consortium Status Rita1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025342 VEGA Gene Model | MGI Sequence Detail 18285 C57BL/6J ±  kb
transcript OTTMUST00000062375 VEGA | MGI Sequence Detail 1573 Not Applicable 
polypeptide OTTMUSP00000030736 VEGA | MGI Sequence Detail 253 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(4) UniProt(4)
Polymorphisms
SNPs within 2kb(10 from dbSNP Build 137)
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(25)
Other
accession IDs
MGI:2140999, MGI:2141332

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory