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5430405H02Rik Gene Detail
Summary
  • Symbol
    5430405H02Rik
  • Name
    RIKEN cDNA 5430405H02 gene
  • Synonyms
    2610307N17Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921737
    NCBI Gene: 74487
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:156852403-156862945 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 77.88 cM, cytoband H2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    123 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921737
lncRNA gene Chr2:156844351-156862963 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015482
unclassified non-coding RNA gene Chr2:161782196-161808603 (-)
A/J MGP_AJ_G0015459
unclassified non-coding RNA gene Chr2:155331200-155355169 (-)
AKR/J MGP_AKRJ_G0015423
unclassified non-coding RNA gene Chr2:159848962-159874646 (-)
BALB/cJ MGP_BALBcJ_G0015422
unclassified non-coding RNA gene Chr2:155620370-155639159 (-)
C3H/HeJ MGP_C3HHeJ_G0015245
unclassified non-coding RNA gene Chr2:160193381-160212094 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015876
unclassified non-coding RNA gene Chr2:166491203-166517655 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013614
unclassified non-coding RNA gene Chr2:148790919-148809571 (-)
CAST/EiJ MGP_CASTEiJ_G0014797
unclassified non-coding RNA gene Chr2:160530206-160552419 (-)
CBA/J MGP_CBAJ_G0015226
unclassified non-coding RNA gene Chr2:172572085-172591249 (-)
DBA/2J MGP_DBA2J_G0015320
unclassified non-coding RNA gene Chr2:154501657-154522085 (-)
FVB/NJ MGP_FVBNJ_G0015327
unclassified non-coding RNA gene Chr2:152871212-152894189 (-)
LP/J MGP_LPJ_G0015398
unclassified non-coding RNA gene Chr2:161892513-161910666 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015351
unclassified non-coding RNA gene Chr2:176450052-176472679 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015916
unclassified non-coding RNA gene Chr2:159706653-159728162 (-)
PWK/PhJ MGP_PWKPhJ_G0014585
unclassified non-coding RNA gene Chr2:154009726-154028956 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014373
unclassified non-coding RNA gene Chr2:158649932-158667684 (-)
WSB/EiJ MGP_WSBEiJ_G0014904
unclassified non-coding RNA gene Chr2:160598560-160618700 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74487 NCBI Gene Model | MGI Sequence Detail 10543 C57BL/6J ±  kb
transcript NR_015591 RefSeq | MGI Sequence Detail 1509 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 2
Other
Accession IDs
less
MGI:1924041
References
more
  • Summaries
    All 16
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory