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1700080O16Rik Gene Detail
Summary
  • Symbol
    1700080O16Rik
  • Name
    RIKEN cDNA 1700080O16 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921529
    NCBI Gene: 74279
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:51968695-51972772 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 28.33 cM, cytoband A3.3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921529
protein coding gene ChrX:51968693-51972864 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035714
protein coding gene ChrX:47168984-47173061 (-)
A/J MGP_AJ_G0035697
protein coding gene ChrX:47008860-47012936 (-)
AKR/J MGP_AKRJ_G0035617
protein coding gene ChrX:48310003-48314080 (-)
BALB/cJ MGP_BALBcJ_G0035683
protein coding gene ChrX:46582852-46586928 (-)
C3H/HeJ MGP_C3HHeJ_G0035387
protein coding gene ChrX:47420083-47424159 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036213
protein coding gene ChrX:48287379-48291456 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033064
protein coding gene ChrX:44501535-44505600 (-)
CAST/EiJ MGP_CASTEiJ_G0034678
protein coding gene ChrX:34867027-34871106 (-)
CBA/J MGP_CBAJ_G0035361
protein coding gene ChrX:49620059-49624135 (-)
DBA/2J MGP_DBA2J_G0035516
protein coding gene ChrX:46831160-46835236 (-)
FVB/NJ MGP_FVBNJ_G0035464
protein coding gene ChrX:46534791-46538868 (-)
LP/J MGP_LPJ_G0035603
protein coding gene ChrX:47474847-47478924 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035503
protein coding gene ChrX:51189505-51193582 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036230
protein coding gene ChrX:47050165-47054241 (-)
PWK/PhJ MGP_PWKPhJ_G0034377
protein coding gene ChrX:34355814-34359889 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034222
protein coding gene ChrX:35649425-35653622 (-)
WSB/EiJ MGP_WSBEiJ_G0034822
protein coding gene ChrX:46612592-46616669 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031118 Ensembl Gene Model | MGI Sequence Detail 4078 C57BL/6J ±  kb
transcript ENSMUST00000033449 Ensembl | MGI Sequence Detail 1454 Not Applicable  
polypeptide ENSMUSP00000033449 Ensembl | MGI Sequence Detail 284 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002190 MAGE homology domain
    IPR037445 Melanoma-associated antigen
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 18
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory